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Sabuni, C.

Publications and source records attributed to Sabuni, C..

6 recordsLinked to original sources

Microparasite prevalence in Southern giant pouched rats (Cricetomys ansorgei) in Morogoro, Tanzania.

Rodents play a critical role in the transmission of zoonotic pathogens, with environmental changes and increasing human-wildlife interactions further amplifying disease spillover risks. Cricetomys spp., commonly found in both human dwellings and agricultural fields, are frequently hunted for consumption, potentially facilitating pathogen transmission. However, their roles in pathogen transmission and disease ecology remain poorly understood. This study investigated the prevalence of three microparasite genera, i.e., Bartonella, Hepatozoon, and Anaplasma, in Cricetomys spp. from Morogoro, Tanzania. We observed a prevalence of 71.9% for Bartonella, 17.5% for Hepatozoon, and 1.8% for Anaplasma. To our knowledge, this is the first study to investigate Bartonella, Hepatozoon, and Anaplasma in Cricetomys spp. in Tanzania. Furthermore, preliminary results indicate that Bartonella infection prevalence is influenced by habitat type, with a significantly higher prevalence observed in rural areas compared to urban areas. This study underscores the potential role of Cricetomys spp. as important reservoirs of infectious diseases.

ecology↗

Efficiency of Anthelmintic Treatment and Its Effect on Microparasite Dynamics in Wild Mastomys natalensis

Co-infections between helminths and microparasites can influence disease dynamics with potential public health implications. However, establishing clear cause-and-effect relationships from natural populations remains challenging. One approach to address this is through perturbation experiments, where a specific parasite is selectively reduced to directly observe its impact on co-infecting parasites. While such experiments have been conducted in wild rodent populations, they have not yet been explored in Africa, despite the continents importance for emerging infectious diseases and zoonoses. In this study, we investigated potential helminth-microparasite interactions in wild Mastomys natalensis in Tanzania by using anthelmintics to reduce helminth infections. We first assessed the efficacy of two anthelmintic treatments, ivermectin and pyrantel pamoate, in wild-caught M. natalensis, finding that both treatments significantly reduced gastrointestinal nematodes, with pyrantel pamoate being more effective than ivermectin. Additionally, we examined how helminth reduction influenced microparasite prevalence. Our results show that pyrantel pamoate treatment was associated with a decrease in Morogoro virus seropositivity over time, while anthelmintic treatment had no significant effect on Bartonella infection probability.

ecology↗

Antibodies against medically relevant arthropod-borne viruses in the ubiquitous African rodent Mastomy natalensis

Over the past decades, the number of arthropod-borne virus (arbovirus) outbreaks has increased worldwide. Knowledge regarding the sylvatic cycle (i.e., non-human hosts/environment) of arboviruses is limited, particularly in Africa, and the main hosts for virus maintenance are unknown. Previous studies have shown the presence of antibodies against certain arboviruses (i.e., chikungunya-, dengue- and zika virus) in African non-human primates and bats. We hypothesize that small mammals, specifically rodents, may function as amplifying hosts in anthropogenic environments. The detection of RNA of most arboviruses is complicated by the viruss short viremic period within their hosts. An alternative to determine arbovirus hosts is by detecting antibodies, which can persist several months. We developed a high-throughput multiplex immunoassay to detect antibodies against 15 medically relevant arboviruses. We used this assay to assess almost 1,300 blood samples of the multimammate mouse, Mastomys natalensis from Tanzania. In 24% of the samples, we detected antibodies against at least one of the tested arboviruses, with high seroprevalences of antibodies reacting against dengue virus serotype one (7.6%) and two (8.4%) and chikungunya virus (6%). Seroprevalence was higher in females and increased with age, which could be explained by inherent immunity and behavioral differences between sexes and the increased chance of exposure to an arbovirus with age. We evaluated whether antibodies against multiple arboviruses co-occur more often than randomly and found that this may be true for some members of the Flaviviridae and Togaviridae. In conclusion, the development of an assay against a wide diversity of medically relevant arboviruses enabled the analysis of a large sample collection of one of the most abundant African small mammals. Our findings suggest a role in the transmission of multiple arboviruses by this ubiquitous rodent and provide a solid foundation for future molecular screening to elucidate the role in the arbovirus transmission cycle. Author summaryOne of the main causes of zoonotic related human morbidity and mortality is the transmission of arthropod-borne viruses such as dengue virus, Yellow Fever virus, and chikungunya virus. These viruses cannot only infect humans but also livestock, pets, and wildlife, though our understanding of their non-human hosts remains limited. Rodents are thought to be an interesting host for these viruses because they can be abundant, often live near humans and some are already known to be viral hosts. However, research has focused on non-human primates, neglecting other potential hosts. To address this gap, we have developed a high-throughput antibody test to screen rodent blood against 15 different arboviruses. Our findings reveal that a proportion of Mastomys natalensis, a common African rodent species, carry antibodies that (cross-)react against these viruses. We hypothesize that immunologically naive juveniles may drive transmission, particularly during population outbreaks. These outbreaks coincide with environmental conditions that are favorable for mosquitoes, the vectors of these viruses. Thus, increasing the risk of spillover to humans, livestock, and wildlife. Understanding the role of rodents in arbovirus transmission dynamics is crucial for mitigating zoonotic disease risks.

immunology↗

First report of astroviruses in Tanzanian bats

Emerging and re-emerging infectious diseases have posed significant global health threats, with many attributed to zoonotic RNA viruses. These pathogens can, under some conditions, cross species barriers, facilitating transmission from animal hosts to humans. Bats, characterised by unique physiological and ecological features, and remarkable species diversity, are recognized to host numerous viruses with cross-species transmission potential. This study aimed to investigate the presence of RNA viruses from a broad diversity of Tanzanian bats while valorising archived biological samples. RNA was extracted from 125 samples (28 faeces and 97 oral swabs) of 17 bat species, followed by PCR amplification targeting five distinct viral genera (Filovirus, Coronavirus, Hantavirus, Paramyxovirus and Astrovirus). Overall, 1.6 % (3/125) of the samples from two bat species (Scotophilus dinganii and Miniopterus fraterculus) tested positive for astrovirus, with the coinfection of one bat with two AstV strains. No samples tested positive for Filovirus, Coronavirus, Hantavirus and Paramyxovirus. Phylogenetic analysis based on RNA-dependent RNA polymerase sequences revealed these sequences are respectively clustering with astroviruses detected in other bat species from the genus Scotophilus from East Asia and with astroviruses detected in Miniopterus bats from Africa and Asia. Altogether, these results are the first report of astroviruses in Tanzanian bats.

molecular biology↗

Incorporating space in hierarchical capture mark recapture models: can we better capture variance?

Capture mark recapture (CMR) models allow the estimation of various components of animal populations, such as survival and recapture probabilities. In recent years, incorporating the spatial distribution of the devices used to detect an animals presence has become possible. By incorporating spatial information, we explicitly acknowledge the fact that there will be spatial structuring in the ecological processes which give rise to the capture data. Individual detection probability is not heterogeneous for a range of different reasons, for example the location of traps within an individuals home range, the environmental context around the trap or the individual characteristics of an animal such as its age. Spatial capture recapture models incorporate this heterogeneity by including the spatial coordinates of traps, data which is often already collected in standard CMR approaches. Here, we compared how the inclusion of spatial data changed estimations of survival, detection probability, and to some extent the probability of seroconversion to a common arenavirus, using the multimammate mouse as our model system. We used a Bayesian framework to develop non spatial, partially spatial and fully spatial models alongside multievent CMR models. First, we used simulations to test whether certain parameters were sensitive to starting parameters, and whether models were able to return the expected values. Then we applied the non-spatial, partially spatial and fully spatial models to a real dataset. We found that bias and precision were similar for the three different model types, with simulations always returning estimates within the 95% credible intervals. When applying our models to the real data set, we found that the non-spatial model predicted a lower survival of individuals exposed to Morogoro virus (MORV) compared to unexposed individuals, yet in the spatial model survival between exposed and non-exposed individuals was the same. This suggests that the non-spatial model underestimated the survival of seropositive individuals, most likely due to an age effect. We suggest that spatial coordinates of traps should always be recorded when carrying out CMR and spatially explicit methods of analysis should be used whenever possible, particularly as incorporating spatial variation may more easily capture ecological processes without the need for additional data collection that can be challenging to acquire with wild animals.

ecology↗

ProxLogs: Miniaturised proximity loggers for monitoring association behaviour in small mammals

O_LIThe ability to monitor associations between wild animals is essential for understanding the processes governing gene transfer, information transfer, competition, predation and disease transmission. C_LIO_LIUntil recently, such insights have been confined to large, visible or captive animals. However, the rapid development of miniature sensors for consumer electronics is allowing ecologists to monitor the natural world in ways previously considered impossible. C_LIO_LIHere we describe miniature (<1g) proximity loggers we have developed that use Bluetooth Low Energy transmission to register contacts between individuals. Our loggers are open source, low cost, rechargeable, able to store up to 2000 contacts, can be programmed in situ and can download data remotely or through a mobile phone application, increasing their utility in remote areas or with species which are challenging to recapture. C_LIO_LIWe successfully trialled our loggers in a range of field realistic conditions, demonstrating that Bluetooth Low Energy is capable of logging associations in structurally complex habitats, and that changes in received signal strength can be equated to short range changes in distance between loggers. Furthermore, we tested the system on starlings (Sturnidae vulgaris). C_LIO_LIThe ability to include other sensors is retained in our prototypes, allowing for the potential integration of physiological and behavioural inference into social networks derived from our approach. Due to its open source nature, small size, flexibility of use and the active research currently being undertaken with Bluetooth Low Energy, we believe that our approach is a valuable addition to the biologging toolkit. C_LI

animal behavior and cognition↗