Biology subjects

Rumschlag, S. L.

Publications and source records attributed to Rumschlag, S. L..

9 recordsLinked to original sources

bioRxiv2024

finsyncR, an R package to synchronize 27 years of fish and invertebrate data across the United States

The United States government collects some of the most comprehensive data on freshwater systems in existence, but barriers exist for new users to apply these data without institutional guidance. finsyncR (fish and invertebrate synchronizer in R) is an R package that streamlines the process of acquiring, processing, and integrating fish and macroinvertebrate datasets collected in streams and rivers, increasing access to cleaned data and ensuring straightforward application of the data. The data sources are the US Environmental Protection Agencys National River and Streams Assessment and US Geological Surveys BioData. The resulting datasets span 27 years (1993 to 2019) and include 8,115 sites, 15,169 sampling events, 963 macroinvertebrate genera, and 687 fish species. We document common challenges to working with these data including understanding sampling designs, harmonizing taxonomy, calculating densities and standardized abundances, accounting for differences in sampling effort, and considering improvements in taxonomic identifications. We anticipate this package will spur research exploring changes in fish and macroinvertebrate communities across space and time and the causes and consequences of those changes.

ecology↗

bioRxiv2022

Global change drivers and the risk of infectious disease

Anthropogenic change is contributing to the rise in emerging infectious diseases, but it remains unclear which global change drivers most increase disease and under what contexts. We amassed a dataset from the literature that includes 1,832 observations of infectious disease responses to global change drivers across 1,202 host-parasite combinations. We found that biodiversity loss, climate change, and introduced species were associated with increases in disease-related endpoints or harm (i.e., enemy release for introduced species), whereas urbanization was associated with decreases in disease endpoints. Natural biodiversity gradients, deforestation, forest fragmentation, and most classes of chemical contaminants had non-significant effects on these endpoints. Overall, these results were consistent across human and non-human diseases. Context-dependent effects of the global change drivers on disease were common and are discussed. These findings will help better target disease management and surveillance efforts towards global change drivers that increase disease. One-Sentence SummaryHere we quantify which global change drivers increase infectious diseases the most to better target global disease management and surveillance efforts.

ecology↗

bioRxiv2021

Elevated nest temperature has opposing effects on host species infested with parasitic nest flies

Environmental factors, such as elevated temperature, can have varying effects on hosts and their parasites, which can have consequences for disease outcomes. The individual direct effects of temperature must be disentangled to determine the net-effect in host-parasite relationships, yet few studies have determined the net-effects in a multi-host system. To address this gap, we experimentally manipulated temperature and parasite presence in the nests of two host species infested by parasitic blowflies (Protocalliphora sialia). We conducted a factorial experiment by increasing temperature (or not) and removing all parasites (or not) in the nests of eastern bluebirds (Sialia sialis) and tree swallows (Tachycineta bicolor). We then measured nestling morphometrics, blood loss, and survival and quantified parasite abundance. We predicted that if temperature had a direct effect on parasite fitness, then elevated temperature would cause similar directional effects on parasite abundance across host species. If temperature had a direct effect on hosts, and therefore an indirect effect on the parasite, parasite abundance would differ across host species. Heated swallow nests had fewer parasites compared to non-heated nests. In contrast, heated bluebird nests had more parasites compared to non-heated nests. The results of our study demonstrate that elevated temperature can have differential effects on host species, which can impact infestation susceptibility. Furthermore, changing climates could have complex net-effects on parasite fitness and host health across multi-host-parasite interactions.

ecology↗

bioRxiv2021

Environmental persistence but not per capita transmission rates of a chytrid fungus determines infection prevalence

AO_SCPLOWBSTRACTC_SCPLOWUnderstanding local-scale variability in disease dynamics can be important for informing strategies for surveillance and management. For example, the amphibian chytrid fungus (Batrachochytrium dendrobatidis; Bd), which is implicated in population declines and species extinctions of amphibians, causes spatially variable epizootics and extirpations of its hosts. Outbreak heterogeneity could be driven by differential survival of zoospores, the free-living infectious life stage of Bd, or the persistence of dead zoospores and/or its metabolites in water, which could induce resistance among hosts. To gain a mechanistic understanding of the potential for variation in local transmission dynamics of Bd, we conducted Bd survival and infection experiments and then fit models to discern how Bd mortality, decomposition, and per-capita transmission rate vary among water sources. We found that infection prevalence differed among water sources, which was driven by differences in mortality rates of Bd zoospores, rather than differences in per-capita transmission rates. Specifically, zoospore mortality rates varied significantly among pond water treatments and were lower in artificial spring water compared to pond water sources. These results suggest that variation in Bd infection dynamics could be a function of differences in exposure of hosts to live Bd. In contrast to the persistence of live zoospores, we found that rates of decomposition of dead zoospores did not vary among water sources. These results may suggest that exposure of hosts to dead Bd or its metabolites, which have been shown to induce acquired resistance, might not commonly vary among nearby sites. Ultimately, a mechanistic understanding of the drivers of variable epizootics of Bd could lead to increases in the effectiveness of surveillance and management strategies.

ecology↗

bioRxiv2020

Pesticide-induced Alterations to Phytoplankton Abundance and Community Structure Alter Ecosystem Respiration: Implications for the Carbon Cycle?

AO_SCPLOWBSTRACTC_SCPLOWCurrent predictions of the effects of synthetic chemicals on freshwater ecosystems are hampered by the sheer number of chemical contaminants entering aquatic systems, the diversity of organisms inhabiting these systems, and uncertainties about how contaminants alter ecosystem metabolism. We conducted a mesocosm experiment that elucidated the responses of ponds composed of phytoplankton and zooplankton to standardized concentrations of 12 pesticides, nested within four pesticide classes and two pesticide types. We show that the effects of the pesticides on algae were consistent within herbicides and insecticides and responses of over 70 phytoplankton species and genera were consistent within broad taxonomic groups. Insecticides generated top-down effects on phytoplankton community composition and abundance, which were associated with persistent increases in ecosystem respiration. Herbicides reduced phytoplankton abundance, which was associated with decreases in primary productivity and ecosystem respiration. These results suggest that widespread pesticide use could have underexplored implications for the global carbon cycle. While these effects on ecosystem respiration were mediated through complex effects on communities, taxonomic groups of organisms responded similarly to pesticide types, suggesting opportunities to simplify ecological risk assessment.

ecology↗

bioRxiv2020

Consistent Effects of Pesticides on Community Structure and Ecosystem Function in Freshwater Systems

AO_SCPLOWBSTRACTC_SCPLOWPredicting ecological effects of contaminants remains challenging because of the sheer number of chemicals and their ambiguous role in biodiversity-ecosystem function relationships. We evaluated responses of pond ecosystems to standardized concentrations of 12 pesticides, nested in four pesticide classes and two pesticide types. We show consistent effects of herbicides and insecticides on ecosystem function, but slightly less consistent effects on community composition. Effects of pesticides on ecosystem functions were often mediated by changes to biodiversity, and our analyses show that consistency in effects of pesticide types on functions was driven by functional redundancy among species. These results suggest that risk assessment of the thousands of registered chemicals on ecosystem responses could be simplified to a smaller number of chemical groups and to groups of functionally redundant taxa.

ecology↗

bioRxiv2018

Evaluating Improvements to Exposure Estimates from Fate and Transport Models by Incorporating Environmental Sampling Effort and Landscape-level Contaminant Use

AO_SCPCAPBSTRACTC_SCPCAPThe Pesticide in Water Calculator (PWC) is a fate and transport model used by the Environmental Protection Agency and Health Canada to estimate pesticide exposures in lentic freshwater ecosystems and make pesticide registration decisions. We leverage over 600,000 field measurements of 31 common insecticides and herbicides to test whether incorporating environmental sampling effort (number of times a pesticide is sampled) and landscape-level contaminant use (national application amount) can improve PWC validation and prediction, respectively. We found that maximum measured concentrations of 38% of herbicides and 42% of insecticides exceeded maximum estimated environmental concentrations (EECs) generated by the PWC, suggesting that EECs often do not represent worst-case exposure. For lentic systems, variance in pesticide field measurements explained by EECs increased by 50% when sampling effort was included. For lotic systems, variance explained increased by only 4%, most likely because lotic systems are sampled over 4.9 times as much as lentic systems. Including landscape-level use more than doubled the ability of the PWC to predict maximum pesticides concentrations in lentic systems. Exposure characterization in risk assessment can be improved by including sampling effort in model validation and landscape-level use in predictions, thus providing more defensible environmental standards and regulations.\n\nO_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=167 SRC=\"FIGDIR/small/472969_ufig1.gif\" ALT=\"Figure 1\">\nView larger version (122K):\norg.highwire.dtl.DTLVardef@601b22org.highwire.dtl.DTLVardef@19591e5org.highwire.dtl.DTLVardef@9d6196org.highwire.dtl.DTLVardef@71c96c_HPS_FORMAT_FIGEXP M_FIG C_FIG

pharmacology and toxicology↗

bioRxiv2018

Mass Amphibian Mortality during Overwintering Related To Fungal Pathogen But Not Larval Environment: An Explanation for Declines?

AO_SCPLOWBSTRACTC_SCPLOWDevelopment of infectious diseases within hosts may be shaped by environmental conditions that cause tradeoffs in energetic demands for immune responses against demands for host growth and survival. Environmental conditions may influence these tradeoffs by affecting size of hosts, or tradeoffs may change across seasons, thereby altering the impacts of diseases on hosts. In the present study, we exposed northern leopard frog (Lithobates pipiens) tadpoles to varying larval environments (low leaf litter, high density of conspecifics, 40 {micro}g/L atrazine, caged fish, or control) that influenced size at metamorphosis, a measure of host quality. Subsequently, we exposed these metamorphs of to Batrachochytrium dendrobatidis (Bd), a fungal pathogen linked to worldwide host population declines, at metamorphosis and/or 12 weeks later, prior to overwintering. Bd exposure dramatically reduced survival during overwintering and the effect was strongest when frogs were exposed both at metamorphosis and before overwintering. Larval environments, which determined host size, did not influence effects of Bd. Stage-structured models built to assess the impacts of Bd exposure on host populations suggest that Bd exposure at metamorphosis or before overwintering would reduce annual population growth rates by an average of 19% and 41%, respectively. Our study indicates that northern leopard frog hosts suffered little effects of Bd exposures following metamorphosis and that lower host quality did not hamper a frogs ability to respond to Bd. Instead, we provide evidence that Bd exposure can reduce survival and result in population size reductions via reduced recruitment from overwintering mortality, providing a plausible mechanism for enigmatic declines of amphibians in temperate regions.

ecology↗

bioRxiv2018

Host Diet Influences Lethal and Sublethal Responses of Hosts to Amphibian Pathogen Exposure

AO_SCPLOWBSTRACTC_SCPLOWThe severity of the impacts of pathogens on hosts may be driven by environmental factors like resource availability that create tradeoffs on energetic demands for immune responses and basal metabolic activity within the host. These responses can vary among species from sublethal to lethal effects, which can have consequences for the host population trajectories within a community. Chytridiomycosis, caused by the pathogen Batrachochytrium dendrobatidis (or Bd), has been associated with global amphibian population declines. However, it also occurs in populations without appearing to cause mass mortality; the effect of Bd in these situations is not well understood and environmental factors like food abundance that impact host conditions could play an important role in the magnitude of the pathogens impact. In the present study, we exposed American toad (Anaxyrus americanus), northern leopard frog (Lithobates pipiens), and Blanchards cricket frog (Acris blanchardi) metamorphs to Bd and then reared them in the terrestrial habitat under low or high food environments. We found additive effects of Bd and reduced food abundance on host growth and survival that varied according to species. For instance, Bd-induced reductions in American toad survival were greater under low food conditions compared to high food conditions but survival of northern leopard frogs and Blanchards cricket frogs was not affected by Bd. For northern leopard frogs and Blanchards cricket frogs, low food abundance resulted in the lower growth rates under Bd exposure compared to high food abundance. Additionally, we developed stage-structured population models for American toads to assess if reduced survival of metamorphs exposed to Bd under conditions of low and high food abundance could influence population trajectories; models indicated that Bd exposure would reduce annual population growth rates by 14% under conditions of high food abundance and 21% under conditions of low food abundance. Our results suggest that environmental conditions that influence resource availability for species that are sensitive or tolerant to Bd may increase the negative effects of Bd on host growth and survival, which could have important implications for how populations and communities with infected members respond over time.

ecology↗