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Biology subjects

Robeson, L.

Publications and source records attributed to Robeson, L..

2 recordsLinked to original sources

Canonical G-protein coupled receptors of vascular plants

G-protein coupled receptors (GPCRs) are responsible for translating environmental signals of various types into cellular signals. Over 40 thousand GPCR orthologs have been discovered in the supergroup Unikonta, and around 800 genes encode for GPCRs in the human genome. In contrast to this astonishing variety, only a handful of GPCR-related genes have been reported in vascular plants, a major group within land plants. In an attempt to advance our understanding of plant GPCRs as well as their role in plant cellular signaling, here we present comprehensive bioinformatic analysis that includes phylogenetic hypotheses, in silico structural analysis, and tissue distribution of transcripts. Altogether, our work strongly suggests that GCR1 is the sole genuine GPCR expressed in Embriophyta. Finally, we briefly discuss the potential role of GCR1 in root hairs, the tubular outgrowths in root epidermal cells that are involved in nutrient absorption, environmental interaction, and root development.

evolutionary biology↗

Evolutionary and Structural Bioinformatics Reveal GPR89 as a Conserved Solute Carrier Transporter

Also called the Golgi pH regulator (GPHR), GPR89 is an orphan membrane protein found in nearly all eukaryotic lineages. Despite its broad phylogenetic distribution, the evolutionary history, structural diversity, and function of GPR89 remain poorly understood. In this study, we present a comprehensive bioinformatic analysis of GPR89 in Eukarya by integrating phylogenetic reconstruction, genomic synteny, sequence conservation, and structural modeling. While GPR89 is typically encoded as a single-copy gene, we identified lineage-specific duplications in both vascular plants and vertebrates. In contrast to the large sequence conservation, large differences can be observed in whether plants and animals preserve the gene structure flanking GPR89. Structural phylogenetic clustering places GPR89 within the solute carrier (SLC) superfamily, supporting previous reports claiming transporter-like activity rather than GPCR signaling. Predicted structures reveal a unique intracellular hairpin loop and a conserved transmembrane core compatible with transport activity. Our findings provide a unifying framework for interpreting the divergent functional roles reported for GPR89 and establish it as a structurally conserved, evolutionarily stable member of the SLC superfamily.

bioinformatics↗