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Rivera-Yoshida, N.

Publications and source records attributed to Rivera-Yoshida, N..

5 recordsLinked to original sources

Multi-Stable Bimodal Perceptual Coding within the Ventral Premotor Cortex

Neurons in the primate ventral premotor cortex (VPC) respond to both tactile and acoustic stimuli, yet how they integrate and process information from these sensory modalities remains unclear. To investigate this, we recorded VPC neuronal activity in two trained monkeys performing a bimodal detection task (BDT), in which they reported the presence or absence of either a tactile or an acoustic stimulus. Single-cell analyses revealed diverse response types, including purely tactile, purely acoustic, bimodal, and neurons with sustained activity during the decision maintenance delay--the period between stimulus offset and motor response. To further examine VPCs role in the BDT, we applied dimensionality reduction techniques to uncover low-dimensional latent dynamics in the neuronal population and conducted parallel analyses using a recurrent neural network (RNN) model trained on the same task. Neural trajectories for tactile and acoustic responses diverged sharply, whereas in stimulus-absent trials, the dynamics remained at rest. During the delay period, the trajectories exhibited a pronounced rotational dynamic, shifting toward a subspace orthogonal to the sensory response space, suggesting memory maintenance through stable equilibria. This indicates that network dynamics can sustain distinct stable states corresponding to the three potential task outcomes. Using low-dimensional modeling, we propose a universal dynamical mechanism that underlies the transition from sensory processing to memory retention, aligning with both experimental and computational findings. These results demonstrate that VPC neurons encode bimodal information, integrate competing sensory inputs, and maintain decisions across the delay period, regardless of sensory modality.

neuroscience↗

Unravelling a diversity of cellular structures and aggregation dynamics during the early development of Myxococcus xanthus

Aggregation underlies collective dynamics of a diversity of organisms, enabling the formation of complex structures and emergent behaviours in interaction with the environment. Myxococcus xanthus, a social bacterium, is a valuable model for studying aggregation, particularly in the development and evolution of multicellularity. While the collective behaviour of M. xanthus has been largely studied under very crowded, ideal, conditions, there is a lack of understanding at not crowded or sparse conditions. In this work, we study the early stages of emergent collective behaviour of M. xanthus under nutrient-poor and low density conditions, uncovering the formation of diverse cellular structures with different shapes and sizes, ranging from individual cells to networks comprising thousands of cells. We study their motility patterns and their prevalence along development, and argue over their cross-scale role on the populations exploratory dynamics. This work contributes to understanding key, yet largely understudied, aspects in the early stages of multicellular development in myxobacteria, shedding light on the dynamics underlying aggregative processes in this and other taxa and study systems.

developmental biology↗

The environment topography alters the transition from single-cell populations to multicellular structures in Myxococcus xanthus

The social soil-dwelling bacteria Myxococcus xanthus can form multicellular structures, known as fruiting bodies. Experiments in homogeneous environments have shown that this process is affected by the physico-chemical properties of the substrate, but they have largely neglected the role of complex topographies. We experimentally demonstrate that the topography alters single-cell motility and multicellular organization in M. xanthus. In topographies realized by randomly placing silica particles over agar plates, we observe that the cells interaction with particles drastically modifies the dynamics of cellular aggregation, leading to changes in the number, size and shape of the fruiting bodies, and even to arresting their formation in certain conditions. We further explore this type of cell-particle interaction in a minimal computational model. These results provide fundamental insights into how the environment topography influences the emergence of complex multicellular structures from single cells, which is a fundamental problem of biological, ecological and medical relevance.

biophysics↗

A Systems Biology perspective of Dynamical Patterning Modules in the transition to multicellularity: lessons from an aggregative bacteria

Development and evolution are dynamical processes under the continuous control of organismic and environmental factors. Generic physical processes, associated with biological materials and certain genes or molecules, provide a morphological template for the evolution and development of organism forms. Generic dynamical behaviors, associated with recurring network motifs, provide a temporal template for the regulation and coordination of biological processes. The role of generic physical processes and their associated molecules in development is the topic of the Dynamical Patterning Module (DPM) framework. The role of generic dynamical behaviors in biological regulation is studied via the identification of the associated Network Motifs (NM). We propose a joint DPM-NM perspective on the emergence and regulation of multicellularity focusing on a multicellular aggregative bacterium, Myxococcus xanthus. Understanding M. xanthus development as a dynamical process embedded in a physical substrate provides novel insights into the interaction between developmental regulatory networks and generic physical processes in the evolutionary transition to multicellularity.

systems biology↗

Plastic multicellular development of Myxococcus xanthus: genotype-environment interactions in a physical gradient

In order to investigate the contribution of the physical environment to variation in multicellular development of Myxococcus xanthus, phenotypes developed by different genotypes in a gradient of substrate stiffness conditions were quantitatively characterized. Statistical analysis showed that plastic phenotypes result from the genotype, the substrate conditions and the interaction between them. Also, phenotypes were expressed with scale- and trait-specificity. Overall, the presented information highlights the constructive role of the physical context in the development of microbial multicellularity, with both ecological and evolutionary implications.

developmental biology↗