Search bioRxiv⌕ Search

Biology subjects

Richard, N.

Publications and source records attributed to Richard, N..

6 recordsLinked to original sources

Integrin beta 1 and mannose receptor 2 are involved in the antifungal activity of bronchial epithelial cells through Aspergillus fumigatus lectin FleA interactions

Aspergillus fumigatus is a world-wide saprophyte filamentous fungus which released conidia, its infectious morphotype, in the atmosphere. These conidia are inhaled daily by humans and can colonize the respiratory tract, where they may develop into hyphae, the invasive morphotype. We previously showed that bronchial epithelial cells (BECs) restrict A. fumigatus virulence by inhibiting conidial germination and filament formation through a process requiring PI3K signaling and the conidial fucose-specific lectin FleA. In the present study, we are looking to identify host factors and cellular partners involved in the BEC antifungal response and to define the molecular interactions underpinning FleA recognition. For this, we analyzed transcriptome of BECs infected with A. fumigatus in the presence or absence of the PI3K inhibitor LY294002. Functional involvement of candidate genes was assessed by siRNA knockdown and readouts of fungal filamentation (microscopic scoring and galactomannan release). FleA-interacting host proteins were identified by biotin-FleA affinity co-precipitation coupled to Tandem mass spectrometry, and validated by surface plasmon resonance and biolayer interferometry. The spatiotemporal dynamics of FleA and candidate partners were analyzed by confocal microscopy and proximity ligation assay We demonstrated that BEC antifungal activity involves at least two complementary pathways: a PI3K/laminin-332 axis promoting conidial adhesion, and a FleA-dependent pathway engaging ITGB1 and MRC2 consistent with lectin uptake and trafficking toward LAMP1-positive compartments. These findings nominate FleA-host receptor interactions as attractive targets for anti-adhesive strategies against A. fumigatus. Author summaryFungal pathogens are an increasing threat to public health, as they are becoming more common and harder to treat due to rising drug resistance. Among them, Aspergillus fumigatus has been classified as a critical pathogen by the World Health Organization (WHO). This filamentous fungus delivers spores in the air daily, which are constantly inhaled by humans. In people with weakened immunity, these spores can cause a range of lung diseases known as aspergillosis, with severity ranging from mild to life-threatening. Lung epithelial cells are the first cells of the respiratory tract to encounter inhaled spores. In a previous study, we showed that bronchial cells can prevent spore from developing into filaments, the invasive form of A. fumigatus that is responsible for tissue damage. This protective effect depends of on the recognition of a fungal protein called FleA. In the present study, we identified host cell proteins that bind to FleA and transport it into intracellular compartments. Our findings suggest that these proteins help bronchial epithelial cells to internalize fungal spores, thereby blocking their transformation into the invasive filamentous form.

cell biology↗

Gut physiology of rainbow trout (Oncorhynchus mykiss) is influenced more by 1 short-term fasting followed by refeeding than by feeding fishmeal-free diets

Supplementing a fishmeal-free diet with yeast extract improves rainbow trout (Oncorhynchus mykiss) growth performance and modulates the hepatic and intestinal transcriptomic response. These effects are often observed in the long term, but are not well documented after short periods of fasting. Fasting for a few days is a common practice in fish farming, especially before handling the fish, such as for short sorting, tank transfers and vaccinations. In the present study, rainbow trout were subjected to a four-day fast and then refed, for eight days, a conventional diet containing fishmeal (control diet) or alternative diets composed of terrestrial animal by-products supplemented or not with a yeast extract. During the refeeding period alone, most of the parameters considered did not differ significantly in response to the different feeds. Only the expression of claudin-15 was upregulated in fish fed the yeast-supplemented diet compared to the control diet. Conversely, fasting followed by refeeding significantly influenced most of the parameters analyzed. In the proximal intestine, the surface area of villi significantly increased and the density of goblet cell tended to decrease during refeeding. Although no distinct plasma immune response or major signs of gut inflammation were observed, some genes involved in the structure, complement pathway, antiviral functions, coagulation and endoplasmic reticulum stress response of the liver and intestine were significantly regulated by refeeding after fasting. These results indicate that short-term fasting, as commonly practiced in fish farming, significantly alters the physiology of the liver and intestine regardless of the composition of the diet.

physiology↗

Yeast extract improves growth in rainbow trout (Oncorhynchus mykiss) fed a fishmeal-free diet and modulates the hepatic and distal intestine transcriptomic profile

Replacing fishmeal with alternative protein sources and improving new ingredients diets with feed additives are major objectives in aquaculture. The aim of this study was to evaluate benefits for rainbow trout (Oncorhynchus mykiss) of supplementing a fishmeal-free diet, composed of processed animal proteins, with yeast extract. Juvenile rainbow trout (initial weight 37 {+/-} 2 g) were fed either with a control diet (19% fishmeal) or with a diet based on terrestrial animal by-products (17%) supplemented or not with 3% of yeast extract. Effects of the diets were evaluated in a 4-week digestibility trial and a 12-week growth experiment. Fish health was investigated by measuring plasma immune markers and performing histological study of the gut. Underlying molecular responses were investigated using unbiased transcriptomic analysis of the liver and distal intestine. Results indicated that supplementing with 3% yeast extract did not influence nutrient digestibility substantially. Nevertheless, fish fed the supplemented fishmeal-free diet grew more than those fed the non-supplemented processed animal protein diet. Plasma and structural parameters indicated no exacerbated immune response or signs of intestinal inflammation in fish fed the fishmeal-free diets. However, plasma total immunoglobulin M levels and intestinal villi were significantly higher in fish fed the diet supplemented with yeast extract. The transcriptomic analysis revealed that the diets influenced immune, inflammatory, pathogen fighting and coagulation gene-related expressions. These results suggest that the dietary inclusion of yeast can enhance a fishmeal-free diet by improving rainbow trout performances and potentially their robustness.

physiology↗

Low incidence of plastic ingestion among three fish species significant for human consumption on the island of Newfoundland, Canada

This study reports the first baselines of plastic ingestion for three fish species that are common food fish in Newfoundland, Canada. Species collections occurred between 2015-2016 for Atlantic cod (Gadus morhua), Atlantic salmon (Salmo salar), and capelin (Mallotus villosus). The frequency of occurrence (%FO) of plastic ingestion for both spawning Atlantic salmon (n=69) and capelin (n=350) was 0%. Of the 1,010 Atlantic cod collected over two years, 17 individuals had ingested plastics, a %FO of 1.68%. This is the only multi-year investigation of plastic ingestion in Atlantic cod for the Northwest Atlantic, and the first for capelin and salmon in the region. Considering the ecological, economic, and cultural importance of these fish species, this study is the beginning of a longitudinal study of plastic ingestion to detect future changes in contamination levels.\n\nHighlightsO_LIIngestion rate (%FO) of plastics in Atlantic cod is 1.68%\nC_LIO_LIIngestion rate (%FO) of plastics in Atlantic salmon and capelin is 0%\nC_LIO_LIFirst study of plastic ingestion rates in Atlantic salmon and capelin\nC_LIO_LIMulti-year baseline of plastic ingestion in Atlantic cod in the Northwest Atlantic\nC_LIO_LIPlastic ingestion rates for three food fish species in Newfoundland, Canada, are low\nC_LI\n\nTermsO_LIFrequency of occurrence (%FO): the number of individuals in a population or group that have ingested plastics (not indicative of the number of particles ingested per individual)\nC_LI

ecology↗

A zero percent plastic ingestion rate by silver hake (Merluccius bilinearis) from the south coast of Newfoundland, Canada

Silver hake, (Merluccius bilinearis), contributes significant biomass to Northwest Atlantic ecosystems. The incidence of plastic ingestion for 134 individuals collected from Newfoundland, Canada was examined through visual examination of gastrointestinal contents and Raman spectrometry. We found a frequency of occurrence of ingestion of 0%. Through a comprehensive literature review of globally published fish ingestion studies, we found our value to be consistent with 41% (n=100) of all reported fish ingestion rates. We could not statistically compare silver hake results to other species due to low sample sizes in other studies (less than n=20) and a lack of standardized sampling methods. We recommend that further studies should 1) continue to report 0% plastic ingestion rates and 2) should describe location and species-specific traits that may contribute to 0% ingestion rates, particularly in locations where fish consumption has cultural and economic significance.

ecology↗

Low plastic ingestion rate in Atlantic Cod (Gadus morhua) from Newfoundland destined for human consumption collected through citizen science methods

Marine microplastics are a contaminant of concern because their small size allows ingestion by a wide range of marine life. Using citizen science during the Newfoundland recreational cod fishery, we sampled 205 Atlantic cod (Gadus morhua) destined for human consumption and found that 5 had eaten plastic, an ingestion prevalence rate of 2.4%. This ingestion rate for Atlantic cod is the second lowest recorded rate in the reviewed published literature (the lowest is 1.4%), and the lowest for any fish in the North Atlantic. This is the first report for plastic ingestion in fish in Newfoundland, Canada, a province dependent on fish for sustenance and livelihoods.\n\nHighlights (3-5 points, 85 char max including spaces)O_LIPlastic ingestion rate of 2.4% for Atlantic Cod (n=205)\nC_LIO_LIFirst recorded baseline for fish in Newfoundland, Canada\nC_LIO_LIThis plastic ingestion prevalence rate is among the lowest recorded to date\nC_LIO_LIUsed citizen science to collect GI tracts from fish destined for human consumption\nC_LI

ecology↗