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Raghunand, T. R.

Publications and source records attributed to Raghunand, T. R..

5 recordsLinked to original sources

Optineurin is involved in regulating macrophage responses during mycobacterial infection

Autophagy has emerged as a critical innate immune mechanism for host elimination of intracellular pathogens, however, the role of the autophagy receptor optineurin during mycobacterial infection is not fully understood. To address this lacuna, we infected bone marrow-derived macrophages (BMDMs) derived from Optn+/+ and Optn-/- mice with Mycobacterium smegmatis, and observed the infection outcome at sequential time points. While low multiplicity of infection (MOI) did not show any significant difference between BMDMs from the two groups, at high MOI Optn-/- mice-derived macrophages showed significantly lower colony forming unit counts, as well as lower cell counts at 12 h and 24 h post-infection. Quantification of cell numbers and nuclear morphologies at various time points post-infection indicated a markedly higher cell death in the optineurin-deficient macrophages. Optineurin-deficient macrophages showed significantly lower levels of the autophagosomal protein LC3-II upon infection, indicating a potential role for optineurin in regulating autophagy during mycobacterial infection. Moreover, when stimulated by bacterial LPS, optineurin deficient macrophages, showed altered levels of the inflammatory cytokine pro-IL-1{beta}. These observations taken together suggest a novel regulatory role for optineurin during mycobacterial infection, with its deficiency leading to an impairment in macrophage responses.

cell biology↗

The PPE25 (Rv1787)-PE18 (Rv1788)-PPE26 (Rv1789) gene cluster is involved in immune evasion by Mycobacterium tuberculosis

Mycobacterium tuberculosis (M. tb) the causative agent of human tuberculosis, encodes multiple virulence factors to subvert host immune responses. One such class of proteins is encoded by the multigenic PE_PPE family which accounts for 10% of its coding potential. A number of these genes occur in clusters, of which the PPE25(Rv1787)-PE18(Rv1788)-PPE26(Rv1789) locus alone, is organised in a PPE-PE-PPE arrangement. We establish here that this cluster is co-operonic in M. tb, and identify for the first time, PPE25::PPE26 as the sole interacting protein pair encoded by this cluster. Recombinant M. smegmatis strains expressing PPE25, PE18, and PPE26, exhibited enhanced survival in THP-1 macrophages, with infected cells displaying increased levels of the anti-inflammatory cytokine IL-10, and reduced levels of the pro-inflammatory cytokine IL-12. Macrophages infected with recombinant M. smegmatis expressing PPE26 showed increased phosphorylation of the MAP kinase p38, consistent with the known TLR2 binding activity of PPE26. In contrast to strains expressing the individual cluster genes, the recombinant expressing the entire PPE25-PE18-PPE26 operon showed no change in intra-macrophage CFUs, suggestive of an inhibitory role for the PPE25::PPE26 complex in CFU enhancement. Taken together, our findings implicate the PPE25-PE18-PPE26 cluster in playing an immune evasion role in the pathophysiology of M. tb.

microbiology↗

Dissecting the Ca2+ dependence of Mycobacterium tuberculosis DesA1 function

Mycobacterium tuberculosis (M. tb) has a complex cell wall, largely composed of mycolic acids and long-chain fatty acids that play a crucial role in maintaining its integrity and permeability. This complex lipid structure has a role in abrogating the process of phagosome-lysosome fusion and infection establishment. The M. tb desaturase A1 (DesA1) catalyzes the introduction of position-specific double bonds, a key step in the biosynthesis of a diverse range of mycolic acids. We have previously demonstrated that M. tb DesA1 is a Ca2+-binding protein, belonging to the extended {beta}{gamma}-crystallin superfamily. Using a combination of biophysical and genetic approaches, we investigated the structural and functional significance of Ca2+ binding on DesA1 activity. A protein unfolding assay of the protein in the presence and absence of Ca2+ shows that Ca2+ binding imparts structural stability to DesA1. To identify the role of Ca2+, we introduced mutations at key residues in the identified Ca2+-binding motif of DesA1 and generated F303A, E304Q, and F303A-E304Q variants of DesA1. We identified F303 as a hot point which disables the protein for Ca2+ binding. Two other mutations E304Q and F303A-E304Q showed reduced Ca2+ binding. Complementation of a conditionally complemented desA1 deletion mutant strain of Mycobacterium smegmatis with these mutants, either failed to complement its growth phenotype or led to a compromise in complementation. In addition, the F303A and F303A-E304Q complements exhibit increased sensitivity to isoniazid, a first-line anti-tubercular drug, pointing to a cell wall permeability defect in these strains. Our findings highlight the critical importance of Ca2+ in the functioning of DesA1 and its implicit role in the maintenance of mycobacterial cellular integrity.

microbiology↗

Delineating the functional role of the PPE50 (Rv3135) - PPE51 (Rv3136) gene cluster in the pathophysiology of Mycobacterium tuberculosis

The extraordinary success of Mycobacterium tuberculosis (M. tb) has been attributed to its ability to modulate host immune responses. The genome of M. tb encodes multiple immunomodulatory factors, including several proteins of the multigenic PE_PPE family, which comprise about 10% of its coding potential. The presence of these proteins in pathogenic mycobacteria strongly suggests that they play a role in disease pathogenesis. To understand its role in M. tb physiology we have begun to characterise the PPE50 (Rv3135)-PPE51 (Rv3136) gene cluster, one of nine PPE-PPE clusters in the M. tb genome. We demonstrate that this cluster encodes a co-transcriptional unit and that PPE50 and PPE51 interact both in vitro and in vivo, the first demonstration of PPE-PPE interaction. THP-1 macrophages infected with recombinant M. smegmatis strains expressing PPE50 and PPE51 showed less intracellular viability than the control strain containing the vector alone, the decline in viable counts correlating with an increase in transcript levels of inducible nitric oxide synthase (iNOS2). Macrophages infected with the recombinant strains exhibited an upregulation in levels of the anti-inflammatory cytokine IL-10, indicating an immunomodulatory role for these proteins. Using pull-down assays, we discovered TLR1 to be the cognate receptor for PPE50, with signalling through the receptor being indicated by an increase in IRAK1 phosphorylation. All the phenotypes observed on infection of THP-1 macrophages including the decrease in CFUs, the increase in iNOS2 and IL-10 levels, as well as signalling through the receptor, were reversed on treatment of macrophages with an anti-TLR1 antibody prior to infection, validating the functional outcome of PPE50-TLR1 interaction. Our data points to a TLR1 dependent role for the PPE50-PPE51 cluster in promoting bacillary persistence, via CFU reduction and a concomitant upregulation of the anti-inflammatory response - a two-pronged strategy to circumvent host immune surveillance.

microbiology↗

Septum site placement in Mycobacteria - Identification and Characterization of mycobacterial homologues of Escherichia coli MinD

A major virulence trait of Mycobacterium tuberculosis (M. tb) is its ability to enter a dormant state within its human host. Since cell division is intimately linked to metabolic shut down, understanding the mechanism of septum formation and its integration with other events in the division pathway is likely to offer clues to the molecular basis of dormancy. The M. tb genome lacks obvious homologues of several conserved cell division proteins, and this study aimed at identifying and functionally characterising mycobacterial homologues of the E.coli septum site specification protein MinD (Ec MinD). Sequence homology based analyses suggested that the genomes of both M.tb and the saprophyte Mycobacterium smegmatis (M. smegmatis) encode two putative Ec MinD homologues - Rv1708/MSMEG_3743 and Rv3660c/MSMEG_6171. Both Rv1708 and MSMEG_3743 were observed to fully complement the mini-cell phenotype of the E.coli {Delta}minDE mutant HL1, but the other homologues only partially complemented the mutant phenotype. Over-expression of MSMEG_3743 but not MSMEG_6171 in M. smegmatis led to cell elongation and a drastic decrease in CFU counts, indicating the essentiality of MSMEG_3743 in cell-division. Sequence analysis of MSMEG_3743 showed a conserved Walker A motif, the functional role of which was confirmed by a radiolabelled ATPase activity assay. Rv1708 was observed to interact with the chromosome associated proteins ScpA and ParB, pointing to a link between its septum formation role and chromosome segregation. Comparative structural analyses showed Rv1708 to be closer in similarity to Ec MinD than Rv3660c. In summary we have demonstrated that Rv1708 and MSMEG_3743 are true mycobacterial homologues of Ec MinD, adding a critical missing piece to the mycobacterial cell division puzzle.

microbiology↗