Biology subjects

Pommier, T.

Publications and source records attributed to Pommier, T..

5 recordsLinked to original sources

bioRxiv2025

A cold-water coral garden with co-occurring Antipathella subpinnata and Dendrophyllia cornigera in the mesophotic zone of the northern Bay of Biscay

Large aggregations of cold-water corals (CWC), often termed CWC gardens, are considered as biodiversity hotspots and recognized as vulnerable marine ecosystems. Their three-dimensional structure creates important habitat complexity, providing refuge, nursery and feeding areas for many deep-water species. Their vulnerability and limited current knowledge highlight the importance of describing the distribution and habitats of these gardens. Using remotely operated vehicles (ROV), we describe an unprecedented large aggregation of the co-occurring black (Antipathella subpinnata) and yellow (Dendrophyllia cornigera) coral gardens in the mesophotic in the northern Bay of Biscay. These distributions acknowledged their latitudinal and bathymetric distributions, in particular for A. subpinnata. Black and yellow corals presented mean densities of 2.0 {+/-} 1.8 colonies.10 m-2 and 1.5 {+/-} 1.3 colonies.10 m-2, respectively. Following the complex topography of this area, they were mostly fixed on hard substrates, particularly in narrow crests close to or surrounded by sand or mud planes. These findings are essential to develop appropriate local spatial management plans, ultimately contributing to the conservation of these vulnerable ecosystems.

ecology↗

bioRxiv2025

Spatiotemporal changes in soil properties predict plant health at continental scale

Abiotic and biotic soil properties are strong predictors of plant yield globally1-5, but they become unreliable over large areas when plant health is threatened by pathogen6-8. Here we present a novel approach to predict plant health based on spatiotemporal changes in soil chemical and biological properties. We first demonstrate that plant health and soil properties consistently respond to environmental change (organic fertilization) regardless of the soil type or geographical origin. Second, we experimentally show that trackable shifts in soil properties reliably explain soil suppressiveness to the Ralstonia solanacearum bacterial pathogen and that a scalable spatiotemporal model predicts plant health with 84% accuracy across multiple climatic zones and cropping systems. Our results suggest that this tight coupling between soil properties and plant health could facilitate the development of agricultural practices aimed at sustainably improving crop yields while safeguarding crop health.

ecology↗

bioRxiv2024

Plants reverse the positive effect of nutrient addition on the drought resistance of soil multifunctionality

Increasing droughts threaten soil microbial communities and the multiple functions they control in agricultural soils. These soils are often fertilized with mineral nutrients, but it remains unclear how this fertilization may alter the capacity of soil multifunctionality (SMF) to be maintained under drought, and how plant-soil interactions shape these effects. In this study, we used a mountain grassland soil to test the interactive effect of mineral nutrient (Nitrogen and Phosphorous) addition and drought on SMF with and without plants (Lolium perenne) in a mesocosm experiment. We calculated SMF based on 8 microbial properties associated with the capacity of soil microbes to store carbon (C), nitrogen (N) and phosphorous (P) in their biomass, and to process these elements through organic matter depolymerization, mineralization, nitrification and denitrification processes. To investigate mechanisms underlying the SMF response we characterized the associated changes in soil stoichiometry and microbial community composition using 16S and 18S rRNA amplicon sequencing. Our results showed that fertilization decreased the SMF drought resistance when plants were present, but the opposite was observed in the unplanted mountain grassland soil. Our analysis suggested this was due to the interaction of plants, fertilization and drought in influencing four coupled properties related to high SMF: high soil moisture, low microbial C limitation, high bacterial diversity and low bacteria gram positive:gram negative ratio. Altogether, our results suggested that reducing the use of mineral fertilizer for plant production in mountain grassland could improve the ability of their soils to maintain their multifunctionality during drought period. Finally, our study clearly further demonstrated the importance of plant in the complex responses of SMF to global changes and showed that combining stoichiometric and microbial diversity assessment represents a powerful approach to disentangle the underlying mechanisms.

ecology↗

bioRxiv2022

Larval density in the invasive Drosophila suzukii: immediate and delayed effects on life-history traits

The immediate and delayed effects of density are key in determining population dynamics, since they can positively or negatively affect the fitness of individuals. These effects have great relevance for polyphagous insects for which immature stages develop within a single site of finite feeding resources. Drosophila suzukii is a crop pest that induces severe economic losses for agricultural production, however little is known about the effects of density on its life-history traits. In the present study, we (i) investigated the egg distribution resulting from females egg-laying strategy and (ii) tested the immediate and delayed effects of larval density on emergence rate, development time, sex ratio of offspring, fecundity and adult size (a range of 1 to 50 larvae was used). We showed that most of fruits contain several eggs and aggregate of eggs of high density can be found in some fruits. This high density has no immediate effects on the emergence rate, but has effect on larval developmental time. This trait was involved in a trade-off with adult life-history traits: the larval development was reduced as larval density increased, but smaller and less fertile adults were produced. Our results should help to better understand the population dynamics of this species and to develop more successful control programs.

ecology↗

bioRxiv2021

Early Spring Snowmelt and Summer Droughts Strongly Impair the Resilience of Key Microbial Communities in Subalpine Grassland Ecosystems

Subalpine grassland ecosystems are important from biodiversity, agriculture, and touristic perspectives but their resilience to seasonally occurring climatic extremes is increasingly challenged with climate change, accelerating their vulnerability to tipping points. Microbial communities, which are central in ecosystem functioning, are usually considered as more resistant and highly resilient to such extreme events due to their functional redundancy and strong selection in residing habitats. To investigate this, we explored soil microbial responses upon recurrent summer droughts associated with early snowmelt in subalpine grasslands mesocosms set-up at the Lautaret Pass (French Alps). Potential respiration, nitrification and denitrification were monitored over a period of two growing seasons along with quantification of community gene abundances of total bacteria as well as (de)nitrifiers. Results revealed that droughts had a low and short-term adverse impact on bacterial total respiration supporting their hypothesized high resilience, i.e., resistance and ability to recover. Nitrification and abundances of the corresponding functional guilds showed relatively strong resistance to summer droughts but declined in response to early snowmelt. This triggered a cascading effect on denitrification but also on abundances of denitrifying communities which recovered from all climatic extremes except from the summer droughts where nitrifiers were collapsed. Denitrification and respective functional groups faced high impact of applied stresses with strong reduction in abundance and activity of this specialized community. Although, consequently lower microbial competition for nitrate may be positive for plant biomass production, warnings exist when considering the potential nitrogen leaching from these ecosystems as well as risks of greenhouses gases emission such as N2O.

ecology↗