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Pokorna, S.

Publications and source records attributed to Pokorna, S..

2 recordsLinked to original sources

Ceramide Connects TNF-α Signaling to Organelle Biophysical Remodeling

Ceramides are essential bioactive lipids involved in cell physiology and stress responses, yet the mechanisms linking their biophysical effects on membranes to downstream cellular outcomes remain incompletely understood. Here, we demonstrate that endogenous ceramide generation in response to TNF--induced stress results in the rapid remodeling of the plasma membrane, triggering a cascade of cellular events. Ceramide accumulation increases membrane order and drives the formation of internalizing vesicles enriched in ceramides, which traffic through the endolysosomal system. These vesicles act as carriers that transmit membrane remodeling signals to intracellular compartments, altering their biophysical properties and function. In parallel, ceramide production reprograms lipid droplet metabolism, decreasing polarity and modifying gene expression related to lipid storage. Our findings provide direct evidence that ceramides function as biophysical integrators of the TNF- stress response, coupling membrane order, vesicle trafficking, and lipid metabolic adaptation. This work reveals how localized lipid remodeling at the plasma membrane propagates intracellularly to support cellular adaptation and homeostasis under inflammatory stress.

biophysics↗

Effect of helical kink in antimicrobial peptides on membrane pore formation

Every cell is protected by a semipermeable membrane. Peptides with the right properties, e.g. Antimicrobial peptides (AMPs), can disrupt this protective barrier by formation of leaky pores. Unfortunately, matching peptide properties with their ability to selectively form pores in bacterial membranes remains elusive. In particular, the proline/glycine kink in helical peptides was reported to both increase and decrease antimicrobial activity. We used computer simulations and fluorescence experiments to show that a kink in helices affects the formation of membrane pores by stabilizing toroidal pores but disrupting barrel-stave pores. The position of the proline/glycine kink in the sequence further controls the specific structure of toroidal pore. Moreover, we demonstrate that two helical peptides can form a kink-like connection with similar behavior as one long helical peptide with a kink. The provided molecular-level insight can be utilized for design and modification of pore forming antibacterial peptides or toxins.

biophysics↗