Biology subjects

Petit, S.

Publications and source records attributed to Petit, S..

7 recordsLinked to original sources

bioRxiv2026

3D printed titanium anodized effects on human gingival fibroblasts response and bacterial colonization: a dual approach

Mucointegration is as important as osseointegration to ensure the survival of implant-supported prosthesis. Indeed, effective soft tissue integration (STI) prevents the appearance of complication through bacterial dissemination. To optimize STI, electrochemical anodization can be used to nanostructure the trans-gingival part of the prosthetic component. Moreover, Selective Laser Melting (SLM) is a new 3D-manufacturing technique that enables the production of customized implant-supported prosthesis with complex geometry. ObjectiveThe aim of this study is to evaluate the effect of a SLM manufactured and anodized Ti6Al4V surface on the behaviour of both, human gingival fibroblasts and oral bacteria. MethodSLM-Ti6Al4V discs were polished and anodized with defined parameters to obtain nanotubes (NTs) with specific morphology. Surface characterization was assessed through surface topography and wettability. Human gingival Fibroblasts were cultured, and cell morphology was observed by SEM at day 7. Proliferation, viability (day 1,4,7) and adhesion (6 h and 36 h) were analyzed. Then immunofluorescence and RT-qPCR were used to detect the distribution and the gene expression of vinculin at 48 h. An early colonizer (Streptococcus gordonii) was used for a parallel evaluation of bacteriological adhesion. ResultsSLM-ANO-Ti6Al4V showed similar performances in terms of cytotoxicity, compared with a machined and polished titanium surface currently used in clinics. Interestingly, cell adhesion was enhanced on anodized SLM surfaces, with a difference in the distribution of focal adhesion plaques in HGFs, while biofilm formation of S. gordonii was not affected by anodization. SignificanceSLM anodized surface showed promising ability to promote STI while controlling bacterial adhesion.

biophysics↗

bioRxiv2024

Natural weed seed predators reduce crop yield loss due to weeds by 20% in cereal fields

While many herbicide active substances have been banned and weed infestation is a major threat to crop productivity, it is still unknown to what extent natural weed control provided by seed predators can help farmers manage weed communities. We aim to quantify the contribution of seed predators to crop productivity through weed control and to evaluate whether the magnitude of their influence depends on farming systems such as conservation agriculture. We set up 112 seed predator-exclusion cages in 28 cereal fields in France (14 pairs of conservation and conventional agriculture fields), surveyed weed emergence and biomass, measured crop yield and sampled the main seed predators: carabid beetles and rodents. We found that seed predators activity reduces the yield loss due to weeds by 20%. By extrapolation, it represents an economic gain of 285{euro}/ha. However, the yield loss remains at 60% below the maximum crop yield potential reached in the absence of weeds. Moreover, conservation agriculture enhances weed control, but this does not translate into increased crop yield. This study demonstrates the tangible importance of considering seed predators for weed control but highlights the need to combine this approach with weed control practices or to substantially redesign cropping systems to enhance the beneficial effects of biodiversity on crop productivity. Significance statementAlthough weed biomass is the main driver of decreasing the crop productivity worldwide and the use of herbicides is massively disparaged, we have not yet quantified the role played by on-farm biodiversity to control weeds. Using an experimental design set up in 28 commercial cereal fields in France, we showed that weed seed predators reduce crop yield loss due to weeds by 20%. By extrapolation, it represents an economic gain of 285{euro}/ha. However, in the absence of any other weed control practices, the yield loss remains at 60% below the maximum crop yield potential reached in the absence of weeds. This study demonstrates the quantitative importance of considering seed predators to design pesticide-free systems.

ecology↗

bioRxiv2022

Converting cropping systems into seasonal habitat functionality reveals the hump-shaped responses of carabid beetles to agricultural management

O_LIUnderstanding effects on the huge diversity of cropping systems on local biodiversity is challenging but necessary to implement agroecological systems. Through a functional approach, the translation of cropping systems into resource and disturbance gradients is promising to decipher the relationship between cropping systems and biodiversity but has never been implemented for arthropods. C_LIO_LITo investigate contributions of resource and disturbance gradients arising from cropping systems vs environmental context (regional effect, meteorological conditions and landscape characteristics) on beneficial arthropod communities, we used a dataset collected in 60 crop fields from three French areas over a five-years period. It includes all farmers interventions, crop sequences, meteorological data, landscape composition and carabid samplings. C_LIO_LIWe found that the environmental context contributed to about 75% of explained carabid variations on average, while resource and disturbance gradients contributed to about 25% of explained carabid variations. The resource and disturbance gradients were particularly important in winter and spring preceding the spring-summer period to determine carabid variations. C_LIO_LIMoreover, we identified thresholds above which resource and disturbance gradients start being beneficial or detrimental for carabids. For example, a Treatment Frequency Index above 2.07 in spring decreased the total activity density of carabids during the spring-summer period. C_LIO_LISynthesis and application. While implementing for the first time a functional approach to understand the effects of different facets of cropping systems on arthropods, our study also allows us to identify periods and thresholds above which specific practices affect carabids. The identification of such thresholds can guide the provision of recommendations for policy, stakeholders and farmers about how to reduce cropping systems impact on arthropods. C_LI

ecology↗

bioRxiv2020

Word detection in individual subjects is difficult to probe with fast periodic visual stimulation

Measuring cognition in single subjects presents unique challenges. Yet individually sensitive measurements offer extraordinary opportunities, from informing theoretical models to enabling truly individualised clinical assessment. Here, we test the robustness of fast, periodic, visual stimulation (FPVS), an emerging method proposed to elicit detectable responses to written words in the electroencephalogram (EEG) of individual subjects. The method is non-invasive, passive, and requires only a few minutes of testing, making it a potentially powerful tool to test comprehension in those who do not speak or who struggle with long testing procedures. In an initial study, Lochy et al. (2015) used FPVS to detect word processing in 8 out of 10 fluent French readers. Here, we attempted to replicate their study in a new sample of ten fluent English readers. Participants viewed rapid streams of pseudo-words with words embedded at regular intervals, while we recorded their EEG. Based on Lochy et al., we expected that words would elicit a steady-state response at the word-presentation frequency (2 Hz) over parieto-occipital electrode sites. However, across 40 datasets (10 participants, two conditions, and two regions of interest - ROIs), only four datasets met the criteria for a unique response to words. This corresponds to a 10% detection rate. We conclude that FPVS should be developed further before it can serve as an individually-sensitive measure of written word processing.

animal behavior and cognition↗

bioRxiv2019

Finding hidden treasures: a child-friendly neural test of task-following in individuals using functional transcranial Doppler ultrasound

Despite growing interest in the mental life of individuals who cannot communicate verbally, objective and non-invasive tests of covert cognition are still sparse. In this study, we assessed the ability of neurotypical children to understand and follow task instructions by measuring neural responses through functional transcranial Doppler ultrasound (fTCD). We recorded blood flow velocity for the two brain hemispheres of twenty children (aged 9 to 12) while they performed either a language task or a visuospatial memory task, on identical visual stimuli. We extracted measures of neural lateralisation for the two tasks separately to investigate lateralisation, and we compared the left-minus-right pattern of activation across tasks to assess task-following. At the group level, we found that neural responses were left-lateralised when children performed the language task, and not when they performed the visuospatial task. However, with statistically robust analyses and controlled paradigms, significant lateralisation in individual children was less frequent than expected from the literature. Nonetheless, the pattern of hemispheric activation for the two tasks allowed us to confirm task-following in the group of participants, as well as in over half of the individuals. This provides a promising avenue for a covert and inexpensive test of children’s ability to covertly follow task instructions and perform different mental tasks on identical stimuli.Competing Interest StatementThe authors have declared no competing interest.View Full Text

animal behavior and cognition↗

bioRxiv2019

Even neurotypical children are heterogeneous: using multivariate decoding to improve individual subject analysis of lexico-semantic EEG data

In conditions such as minimally-verbal autism, standard assessments of language comprehension are often unreliable. Given the known heterogeneity within the autistic population, it is crucial to design tests of semantic comprehension that are sensitive in individuals. Recent efforts to develop neural signals of language comprehension have focused on the N400, a robust marker of lexical-semantic violation at the group level. However, homogeneity of response in individual neurotypical children has not been established. Here, we presented 20 neurotypical children with congruent and incongruent visual animations and spoken sentences while measuring their neural response using EEG. Despite robust group-level responses, we found high inter-individual variability in response to lexico-semantic anomalies. To overcome this, we analysed our data using temporally and spatially unconstrained MVPA, supplemented by descriptive analyses to examine the timecourse, topography, and strength of the effect. Our results show that neurotypical children exhibit heterogenous responses to lexical-semantic violation, implying that any application to heterogenous disorders such as ASD will require individual-subject analyses that are robust to variation in topology and timecourse of neural responses.Competing Interest StatementThe authors have declared no competing interest.View Full Text

animal behavior and cognition↗

bioRxiv2019

Towards an individualised neural assessment of receptive language in children

PurposeWe aimed to develop a non-invasive neural test of language comprehension to use with non-speaking children for whom standard behavioural testing is unreliable (e.g., minimally-verbal autism). Our aims were three-fold. First, we sought to establish the sensitivity of two auditory paradigms to elicit neural responses in individual neurotypical children. Second, we aimed to validate the use of a portable and accessible electroencephalography (EEG) system, by comparing its recordings to those of a research-grade system. Third, in light of substantial inter-individual variability in individuals neural responses, we assessed whether multivariate decoding methods could improve sensitivity. MethodsWe tested the sensitivity of two child-friendly covert N400 paradigms. Thirty-one typically developing children listened to identical spoken words that were either strongly predicted by the preceding context or violated lexical-semantic expectations. Context was given by a cue word (Experiment 1) or sentence frame (Experiment 2) and participants either made an overall judgement on word relatedness or counted lexical-semantic violations. We measured EEG concurrently from a research-grade system, Neuroscans SynAmps2, and an adapted gaming system, Emotivs EPOC+. ResultsWe found substantial inter-individual variability in the timing and topology of N400-like effects. For both paradigms and EEG systems, traditional N400 effects at the expected sensors and time points were statistically significant in around 50% of individuals. Using multivariate analyses, detection rate increased to 88% of individuals for the research-grade system in the sentences paradigm, illustrating the robustness of this method in the face of inter-individual variations in topography. ConclusionsThere was large inter-individual variability in neural responses, suggesting inter-individual variation in either the cognitive response to lexical-semantic violations, and/or the neural substrate of that response. Around half of our neurotypical participants showed the expected N400 effect at the expected location and time point. A low-cost, accessible EEG system provided comparable data for univariate analysis but was not well suited to multivariate decoding. However, multivariate analyses with a research-grade EEG system increased our detection rate to 88% of individuals. This approach provides a strong foundation to establish a neural index of language comprehension in children with limited communication.

animal behavior and cognition↗