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Biology subjects

Perera, K.

Publications and source records attributed to Perera, K..

3 recordsLinked to original sources

Human knee osteoarthritis patient-specific cartilage-on-a-chip model captures donor differences to stressors and treatments

Knee Osteoarthritis (KOA) is a progressive whole-joint disease without approved disease modifying OA drugs (DMOADs). Effective treatments have been hindered by multiple layers of heterogeneity, including diverse disease etiology and patient-to-patient variability. Here, we present a scalable, KOA patient-derived (PD) cartilage-on-a-chip (CartChip) model integrating end-stage KOA cartilage tissue explants on a microengineered platform that, under mechanical overloading and hyperinflammatory stressors, mimics different KOA etiologies. These stressors drove distinct multivariable model features, including changes in a curated panel of anabolic and catabolic genes, extracellular matrix protein and soluble factors. Exploratory analysis of coordinated model readouts identified stressor-agnostic and -specific KOA disease signatures. Despite using KOA tissue, the model showed improvements to dexamethasone, a symptom-modifying, anti-inflammatory KOA treatment. The model responses to dexamethasone were dependent on both stressor and donor heterogeneity. Exploratory groupings of coordinated model readouts provided proof-of-concept for predicting categories of patient responsiveness to test therapeutics. Annotating patient data provided additional donor-dependent contexts for interpreting model responsiveness. PD-CartChip provides a powerful research platform to potentially surmount the donor and stressor heterogeneity barrier in developing DMOADs.

bioengineering↗

Impact of dietary synbiotics on growth performance, gut morphology, and immune function, and welfare indicators of broiler chickens with or without early life antibiotic supplementation via drinking water

The widespread use of antibiotics in broiler production has contributed to antimicrobial resistance, necessitating the development of sustainable alternatives. Synbiotics, combining probiotics and prebiotics in a synergistic formulation, have emerged as promising candidates to replace antibiotics. This study evaluated the efficacy of dietary synbiotics as alternatives to early-life antibiotic supplementation in broiler chickens, examining their effects on growth performance, gut morphology, and welfare. A total of 80 mixed-sex Cobb 500 broiler chickens were allocated to a 2 x 2 factorial design investigating synbiotic supplementation (Bacillus subtilis and dried fermented Saccharomyces cerevisiae extract) and enrofloxacin treatment (days 0-5) administered via drinking water. During the initial growth period (days 0-7), synbiotic supplementation reduced body weight gain compared to controls. However, synbiotic x antibiotic interactions were observed during days 7-14 and 14-21, where synbiotics without antibiotics produced the highest weight gain in the second week, while controls without either treatment achieved superior performance in the third week. Feed intake was increased by synbiotic supplementation during days 7-14, while antibiotic treatment consistently elevated feed consumption throughout multiple periods and overall trial duration. Feed conversion efficiency was initially impaired by synbiotics (days 0-7) but improved during days 14-21. Antibiotic supplementation resulted in a poorer overall feed conversion ratio. Gut morphological analysis revealed significant synbiotic x antibiotic interactions for duodenal length and empty weights of duodenum and caeca, with synbiotics enhancing these parameters only when combined with antibiotic treatment. Both synbiotic and antibiotic supplementation independently reduced ileal content weight, while antibiotic treatment specifically decreased ileal weight and caecal length. Immune function evaluation through heterophil-to-lymphocyte ratios demonstrated a tendency for interaction, where synbiotics reduced this ratio in the absence of antibiotics but showed no effect when combined with antibiotic treatment. Neither treatment affected spleen or bursa weights, indicating minimal impact on immune organ development. These findings suggest that while dietary synbiotics show promise as alternatives to antibiotics in broiler production, their efficacy varies depending on concurrent antibiotic exposure and growth phase. Synbiotics demonstrated beneficial effects on gut morphology and stress markers, particularly when administered without concurrent antibiotic treatment, supporting their potential as functional alternatives in antimicrobial-free poultry production.

physiology↗

Post-infection treatment with a protease inhibitor increases survival of mice with a fatal SARS-CoV-2 infection

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection continues to be a serious global public health threat. The 3C-like protease (3CLpro) is a virus protease encoded by SARS-CoV-2, which is essential for virus replication. We have previously reported a series of small molecule 3CLpro inhibitors effective for inhibiting replication of human coronaviruses including SARS-CoV-2 in cell culture and in animal models. Here we generated a series of deuterated variants of a 3CLpro inhibitor, GC376, and evaluated the antiviral effect against SARS-CoV-2. The deuterated GC376 displayed potent inhibitory activity against SARS-CoV-2 in the enzyme and the cell-based assays. The K18-hACE2 mice develop mild to lethal infection commensurate with SARS-CoV-2 challenge doses and was proposed as a model for efficacy testing of antiviral agents. We treated lethally infected mice with a deuterated derivative of GC376. Treatment of K18-hACE2 mice at 24 hr post infection with a derivative (compound 2) resulted in increased survival of mice compared to vehicle-treated mice. Lung virus titers were decreased, and histopathological changes were ameliorated in compound 2-treated mice compared to vehicle-treated mice. Structural investigation using high-resolution crystallography illuminated binding interactions of 3CLpro of SARS-CoV-2 and SARS-CoV with deuterated variants of GC376. Taken together, deuterated GC376 variants have excellent potential as antiviral agents against SARS-CoV-2.

microbiology↗