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Pagter, M.

Publications and source records attributed to Pagter, M..

2 recordsLinked to original sources

Impacts of thermal fluctuations on heat tolerance and its metabolomic basis across plant and animal species

Temperature varies on a daily and seasonal scale and thermal fluctuations are likely to become even more pronounced under future climate changes. Studies suggest that plastic responses are crucial for species ability to cope with thermal stress, but traditionally laboratory studies on ectotherms are performed at constant temperatures and often limited to a few model species and thus not representative for the natural environment. We argue that thermoregulatory behavior and microhabitat shape the response exerted by different organisms to fluctuating temperatures. Thus, a sessile organism incapable of significant behavioral temperature avoidance will be more plastic and exert greater physiological response to thermal fluctuations than mobile organisms that can quickly evade temperature stress. Here we investigate how acclimation to fluctuating (13.2-26.9{degrees}C) and constant (20.4{degrees}C) temperatures impact heat stress tolerance across a plant (Arabidopsis thaliana) and two animal species (Orchesella cincta and Drosophila melanogaster) inhabiting widely different thermal microhabitats and selective pasts. Moreover, we investigate the underlying metabolic responses of acclimation using an NMR metabolomics approach. We find increased heat tolerance for all species exposed to fluctuating acclimation temperatures; most pronounced for A. thaliana which also showed a strong metabolic response to thermal fluctuations. Generally, sugars were more abundant across A. thaliana and D. melanogaster when exposed to fluctuating compared to constant temperatures, whereas amino acids were less abundant. However, we do not find much evidence for similar metabolomics responses to fluctuating temperature acclimation across species. Differences between the investigated species ecology, their distinct selective past and different ability to behaviorally thermoregulate may have shaped their physiological response to thermal fluctuations.

physiology↗

Transcriptional and post-transcriptional regulation and transcriptional memory of chromatin regulators in response to low temperature

Chromatin regulation ensures stable repression of stress-inducible genes under non-stress conditions and transcriptional activation and memory of such an activation of those genes when plants are exposed to stress. However, there is only limited knowledge on how chromatin genes are regulated at the transcriptional and post-transcriptional level upon stress exposure and relief from stress. We have therefore set-up a RT-qPCR-based platform for high-throughput transcriptional profiling of a large set of chromatin genes. We find that the expression of a large fraction of these genes is regulated by cold. In addition, we reveal an induction of several DNA and histone demethylase genes and certain histone variants after plants have been shifted back to ambient temperature (deacclimation), suggesting a role in the memory of cold acclimation. We also re-analyse large scale transcriptomic datasets for transcriptional regulation and alternative splicing (AS) of chromatin genes, uncovering an unexpected level of regulation of these genes, particularly at the splicing level. This includes several vernalization regulating genes whose AS results in cold-regulated protein diversity. Overall, we provide a profiling platform for the analysis of chromatin regulatory genes and integrative analyses of their regulation, suggesting a dynamic regulation of key chromatin genes in response to low temperature stress.

plant biology↗