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Pacheco-Labrador, J.

Publications and source records attributed to Pacheco-Labrador, J..

5 recordsLinked to original sources

Assessing the impact of data uncertainty on remote sensing estimation of plant functional diversity

Remote sensing mapping of plant functional diversity (PFD) is increasingly used at the science-policy interface. Yet assessments of uncertainty and quality standards for these products are seldom provided, as the impact of measurement uncertainty on PFD estimates, i.e., the variability across pixels, is still poorly understood. We use trait maps and hyperspectral imagery simulations from the Biodiversity Observing System Simulation Experiment (BOSSE) to assess the impact of different types of uncertainty on the estimation PFD. Results show that uncertainties stemming from random errors affect the estimation of PFD (up to three times) more than those arising from systematic errors, with spectral and spatial error correlation reducing their impact. Standardization computing PFD metrics reduces systematic errors, making in-situ-measured plant traits and remote sensing reflectance factors more robust estimators of PFD than other remote sensing proxies derived from reflectance (e.g., spectral indices or optical traits). The impact of uncertainty propagation from reflectance factors to these often-preferred secondary proxies increases with their complexity. Nonetheless, trait uncertainty can spuriously diminish differences between PFD derived from the ground (plant traits) and satellite imagery, as it can reduce uncertainty-induced or inherent biases between the PFD metrics computed from each trait (plant or spectral). This study provides new understanding of how uncertainty propagates into PFD estimates; this knowledge is relevant for optimizing the selection and defining quality requirements for PFD estimation. It also suggests that random and systematic uncertainties should be quantified separately at the reflectance factor level to guide their use and interpretation in PFD analysis.

ecology↗

Bridging the gaps between field-based ecology and remote sensing to estimate plant functional diversity: a systematic review

Understanding plant functional diversity across scales requires integrating field-based ecology and remote sensing, yet these disciplines differ in how traits are studied. We evaluated the conceptual and methodological convergence between these disciplines. Our results reveal that field-based ecology has undergone longer conceptual development and covers a broader range of traits, while remote sensing has experienced rapid growth driven by technological advances. Both disciplines are increasingly converging on similar concepts. However, major gaps in empirical coverage persist across biomes in both disciplines. Although plant-dominated ecosystems have been extensively studied, extreme ecosystems remain undersampled. While there is considerable diversity in the definition "functional traits", both disciplines converge on using a similar set of traits, reflecting their central role in plant strategies and spectral detectability. Our synthesis underscores the potential for methodological synergy. Harmonizing trait definitions, scaling assumptions, and computational steps involved in estimating plant functional diversity are crucial for building a unified, multiscale framework for biodiversity monitoring in ecosystems undergoing biodiversity loss and climate change. TeaserA synthesis of how field ecology and remote sensing can be aligned to monitor plant functional diversity across scales.

ecology↗

Water Stress Induces Diel Patterns of Root Growth

Growth and death of vegetation control both the amount of carbon held in living biomass and much of the flow between the atmosphere and soils, the largest terrestrial carbon reservoir. However, long-term field datasets on belowground growth dynamics are rare. Knowledge is lacking on how root growth patterns relate to the environment, fluctuating carbon and water availability, and internal plant physiological control, at both seasonal and diel scales. We imaged roots using automated minirhizotrons and interpreting root length density (RLD) automatically twice a day for nine months in a temperate grassland. From winter to autumn, we always observed some root growth in individual images, but with decreasing net RLD (indicative of net turnover) becoming predominant later in the season. Roots grew day-round except during a period of about one month in spring when root growth was only in daytime. This was a period without rain, during which soil moisture depleted rapidly, but not at its driest point. We discuss potential causes for both overall and short-term growth patterns, particularly the change in drivers of growth from internal storage to new photosynthates, or limits imposed by water availability - both soil moisture and rainfall - under shifting environmental conditions.

plant biology↗

Benchmarking remote sensing methods to capture plant functional diversity from space

The development of remote sensing methods to estimate plant functional diversity is limited by mismatches between ecology and remote sensing sampling schemes, and the limited representativeness of local field campaigns. The Biodiversity Observing System Simulation Experiment (BOSSE) provides a modeling framework for benchmarking new methodologies. We used BOSSE to simulate 180 different synthetic "Scenes" encompassing a two-year-long time series of plant trait maps and imagery of hyperspectral reflectance factors, spectral indices, sun-induced chlorophyll fluorescence, land surface temperature, and estimates of plant traits (optical traits). We used these simulations to answer five fundamental, yet unsolved, questions: Q1. How should remote sensing characterize functional diversity in large surfaces (sites)? Diversity metric values saturate with the number of pixels involved, hampering comparisons between plant traits and remote sensing estimates in large areas. The average value of metrics computed over small samples should be used instead. Q2. Which sources of spectral information (or combinations thereof) can best capture plant functional diversity at the site scale? Accounting for background effects is the key. Optical traits (remote sensing estimates of plant traits) are the best estimators for plant functional diversity. Other variables succeed when filtered out of the soil pixels; their combination did not yield additional advantages. Q3. How should remote sensing estimates be validated/compared with plant functional diversity measurements? Leaf area index (LAI) is a better proxy of abundance than the pixel for QRao, but not for variance-based partitioning. It is more sensitive to sample size, but also more resistant to suboptimal spatial resolution. Q4. When (in the phenological year) can remote sensing best capture site-scale plant functional diversity? The estimation error decreased with LAI and stabilized at values above 1 m{superscript 2}/m{superscript 2}. Q5. Which approaches and remote sensing variables are more resistant to the effects of suboptimal spatial resolution? Optical traits, fluorescence, and reflectance factors were the most robust variables. Still, field data resolution needs to be degraded to match the sensors resolution. We found a relative spatial resolution threshold of [~]30 % (where the pixel is around three times larger than the plants). Simulation frameworks like BOSSE enable testing methodologies beyond local contexts and address the current shortage of suitable global datasets, supporting the application and development of methods for assessing plant functional diversity with remote sensing. In the future, BOSSE could contribute to understanding observational results, refining and pre-testing new methodologies, and supporting the development of comparable experimental datasets.

ecology↗

senSCOPE: Modeling radiative transfer and biochemical processes in mixed canopies combining green and senescent leaves with SCOPE

Semi-arid grasslands and other ecosystems combine green and senescent leaves featuring different biochemical and optical properties, as well as functional traits. Knowing how these properties vary is necessary to understand the functioning of these ecosystems. However, differences between green and senescent leaves are not considered in recent models representing radiative transfer, heat, water and CO2 exchange such as the Soil-Canopy Observation of Photosynthesis and Energy fluxes (SCOPE). Neglecting the contribution of senescent leaves to the optical and thermal signal of vegetation limits the possibilities to use remote sensing information for studying these ecosystems; as well as neglecting their lack of photosynthetic activity increases uncertainty in the representation of ecosystem fluxes. In this manuscript we present senSCOPE as a step towards a more realistic representation of mixed green and senescent canopies. senSCOPE is a modified version of SCOPE model that describes a canopy combining green and senescent leaves with different properties and function. The model relies on the same numerical solutions than SCOPE, but exploits the linear nature of the scattering coefficients to combine optical properties of both types of leaf. Photosynthesis and transpiration only take place in green leaves; and different green and senescent leaf temperatures are used to close the energy balance. Radiative transfer of sun-induced fluorescence (SIF) and absorptance changes induced by the xanthophyll cycle action are also simulated. senSCOPE is evaluated against SCOPE both using synthetic simulations, forward simulations based on observations in a Mediterranean tree-grass ecosystem, and inverting dataset of ground measurements of reflectance factors, SIF, thermal radiance and gross primary production on a heterogeneous and partly senescent Mediterranean grassland. Results show that senSCOPE outputs vary quite linearly with the fraction of green leaf area, whereas SCOPE does not respond linearly to the effective leaf properties, calculated as the weighted average of green and senescent leaf parameters. Inversion results and pattern-oriented model evaluation show that senSCOPE improves the estimation of some parameters, especially chlorophyll content, with respect SCOPE retrievals during the dry season. Nonetheless, inaccurate knowledge of the optical properties of senescent matter still complicates model inversion. senSCOPE brings new opportunities for the monitoring of canopies mixing green and senescent leaves, and for improving the characterization of the optical properties of senescent material.

ecology↗