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Biology subjects

Ovenden, N.

Publications and source records attributed to Ovenden, N..

2 recordsLinked to original sources

Neural Network Guided Calibration for Fast Virtual Twin Generation in Cardiovascular ODE Models

Calibration of closed-loop lumped-parameter cardiovascular models remains a major bottleneck for scalable digital-twin generation because inverse estimation is ill-conditioned and typically requires computationally expensive iterative forward simulation. This study investigates whether a supervised neural network (NN) can provide a fast inverse estimator for a paediatric sepsis cardiovascular ODE model by learning a direct mapping from prescribed haemodynamic target vectors to calibrated parameter sets. Training data are generated by sampling model parameters at random, forward-simulating the closed-loop system to steady state, and pairing the resulting target summaries with the corresponding parameters; the same target definitions and evaluation populations are used throughout for consistency. We evaluate NN inference by forward re-simulation to steady state and benchmark performance against a simulator-constrained calibration reference (Embedded Gradient Descent, EGD) using relative-error statistics, distributional similarity of achieved outputs and inferred parameters (median shift, IQR ratio, Wasserstein distance, KS statistic), and target-space localisation of parameter-space disparity (cosine distance). The NN reproduces the prescribed targets with predominantly small errors for most samples, while the largest discrepancies are confined to a well defined set of target configurations that also yield high residuals under the reference method, indicating feasibility limits of the target/model combination. Overall, NN-guided calibration provides a computationally efficient accelerator for virtual-twin generation and target-space screening, with simulator-based refinement and forward re-simulation retained to handle infeasible regimes and enforce mechanistic plausibility.

physiology↗

Comparing physiological impacts of positive pressure ventilation versus self-breathing via a versatile cardiopulmonary model incorporating a novel alveoli opening mechanism

Mathematical models can be used to generate high-fidelity simulations of the cardiopulmonary system. Such models, when applied to real patients, can provide valuable insights into underlying physiological processes that are hard for clinicians to observe directly. In this work, we propose a novel modelling strategy capable of generating scenario-specific cardiopulmonary simulations to replicate the vital physiological signals clinicians use to determine the state of a patient. This model is composed of a tree-like pulmonary system that features a novel, non-linear alveoli opening strategy, based on the dynamics of balloon inflation, that interacts with the cardiovascular system via the thorax. A baseline simulation of the model is performed to measure the response of the system during spontaneous breathing which is subsequently compared to the same system under mechanical ventilation. To test the new lung opening mechanics and systematic recruitment of alveolar units, a positive end-expiratory pressure (PEEP) test is performed and its results are then compared to simulations of a deep spontaneous breath. The system displays a marked decrease in tidal volume as PEEP increases, replicating a sigmoidal curve relationship between volume and pressure. At high PEEP, cardiovascular function is shown to be visibly impaired, in contrast to the deep breath test where normal function is maintained.

physiology↗