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Biology subjects

Noori, B.

Publications and source records attributed to Noori, B..

2 recordsLinked to original sources

The Hindu Kush, not the Indus Valley, divides amphibian biogeographic realms

The boundary between the Palearctic and Oriental biogeographic realms is one of the oldest unresolved problems in Eurasian biogeography. In Central and South Asia, this transition is remarkable and has often been linked to the Indus River Valley, yet the role of adjacent mountain systems and arid landscapes has remained largely untested because critical regions, especially Afghanistan, have been chronically under-sampled due to difficult, long-term socio-political situation. Here we use a unique amphibian material from Afghanistan and adjacent northwestern Pakistan to test whether the Hindu Kush marks the effective boundary between these two realms. Combining molecular barcoding across all seven amphibian genera inhabiting the region with updated distribution records, we find a strikingly consistent lineage turnover centered on the eastern Hindu Kush and adjacent arid systems. Palearctic taxa reach their southeastern limits along the massif, whereas Oriental taxa extend only to its southern foothills. By contrast, Oriental lineages cross the Indus River without detectable phylogeographic break, indicating that the river valley does not function as a major biogeographic boundary for the taxa examined. The Hindu Kush also harbors endemic relict taxa of both Palearctic and Oriental affinities, revealing a dual role as both refugium and dispersal barrier. Thus, our results identify the Hindu Kush as the de facto boundary between the Palearctic and Oriental realms in this part of Eurasia and show that under-sampled arid-montane regions can disproportionately improve global biogeographic frameworks.

evolutionary biology↗

Differential regulation of Retinoic Acid Metabolism in Fanconi Anemia

Fanconi anemia (FA) is a rare genetic disease characterized by heterogeneous congenital abnormalities and increased risk for bone marrow failure and cancer. FA is caused by mutation of any one of 23 genes, the protein products of which function primarily in the maintenance of genome stability. An important role for the FA proteins in the repair of DNA interstrand crosslinks (ICLs) has been established in vitro. While the endogenous sources of ICLs relevant to the pathophysiology of FA have yet to be clearly determined, a role for the FA proteins in a two-tier system for the detoxification of reactive metabolic aldehydes has been established. To discover new metabolic pathways linked to FA, we performed RNA-seq analysis on non-transformed FA-D2 (FANCD2-/-) and FANCD2-complemented patient cells. Multiple genes associated with retinoic acid metabolism and signaling were differentially expressed in FA-D2 (FANCD2-/-) patient cells, including ALDH1A1 and RDH10, which encode for retinaldehyde and retinol dehydrogenases, respectively. Increased levels of the ALDH1A1 and RDH10 proteins was confirmed by immunoblotting. FA-D2 (FANCD2-/-) patient cells displayed increased aldehyde dehydrogenase activity compared to the FANCD2-complemented cells. Upon exposure to retinaldehyde, FA-D2 (FANCD2-/-) cells exhibited increased DNA double-strand breaks and checkpoint activation indicative of a defect in the repair of retinaldehyde-induced DNA damage. Our findings describe a novel link between retinoic acid metabolism and FA and identify retinaldehyde as an additional reactive metabolic aldehyde relevant to the pathophysiology of FA.

biochemistry↗