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Nicolai, B.

Publications and source records attributed to Nicolai, B..

5 recordsLinked to original sources

Tissue-specific responses of the central carbon metabolism in tomato fruit to low oxygen stress

Tomato (Solanum lycopersicum L.) is an important model plant whose fleshy fruit consists of well-differentiated tissues. Recently it was shown that these tissues develop hypoxia during fruit development and ripening. Therefore, we employed a combination of metabolomics and isotopic labeling to investigate the central carbon metabolic response of tomato fruit tissues (columella, septa and mesocarp) to low O2 stress. The concentration and 13C-label enrichment of intermediates from the central carbon metabolism were analyzed using gas chromatography-mass spectrometry. The results showed an increase in glycolytic activity and the initiation of fermentation in response to low O2 conditions. In addition, the up-regulation of the GABA shunt and accumulation of amino acids, alanine and glycine, were observed under low O2 conditions. Notably, tissue specificity was observed at the metabolite level, with concentrations of most metabolites being highest in columella tissue. In addition, there were tissue-specific differences in the central carbon metabolism with the columella exhibiting the highest metabolic activity and sensitivity to the changes in O2 concentration, followed by septa and mesocarp tissues. Our results are consistent with common plant responses and adaptive mechanisms to low O2 stress, while unravelling some tissue-specific differences, increasing our understanding of the intact fruit response to low O2 stress.

physiology↗

Kinetic modeling of ethylene biosynthesis and signaling pathways in ripening tomato fruit

O_LIEthylene biosynthesis and signaling are pivotal pathways in various plant aging processes, including fruit ripening. Kinetic models can be used to better understand metabolic pathways, but modeling of the ethylene-related pathways is limited and the link between these pathways remains unsolved. C_LIO_LIA transcriptomics-based kinetic model was developed, consisting of ordinary differential equations describing ethylene biosynthesis and signaling pathways in tomato during fruit development, ripening and post-harvest storage. C_LIO_LIThis model was calibrated against a large volume of transcriptomic, proteomic and metabolic data during on-vine ripening of tomato fruit grown in winter and summer. The model was validated using data on off-vine postharvest ripening. The ethylene biosynthesis pathway under different conditions appeared to be largely driven by gene expression levels. C_LIO_LIThe ethylene-regulation of fruit ripening of a heat tolerant tomato grown in different seasons is identical but with quantitative differences at the targeted omics levels. This is reflected by some of the same parameters with distinct values for summer and winter fruit. The current model is the first attempt to model the ethylene signaling pathway starting from gene expression, the various protein - protein interactions, including the link with ethylene production, internal ethylene levels and its receptors. C_LI

plant biology↗

Pear (Pyrus communis L. cv. Conference) has shade-tolerant features allowing for consistent agrivoltaic crop yield

Transitioning to a fossil fuel free society requires an increase in solar energy production. However, expanding solar power to farmland competes with food production. Additionally, climate change threatens food security and leads increasingly to yield losses. Agrivoltaics (AV) systems produce solar energy and food on the same field, while sheltering crops. In AV systems, crops grow in a modified environment with reduced solar irradiance, a tempered microclimate and a potential physical cover protecting against hail damage. This research describes pear production under an AV pilot with 24% light reduction for 3 consecutive seasons. AV pear trees yielded 14% less than the reference. Flowering and fruit set was unchanged while AV reduced leaf flavonoid levels. The leaf photosynthetic light response was identical, yet a delayed leaf senescence under AV suggests an adaptation to the modified environment. AV impacted fruit shape, as there was an increase in the number of bottle shaped pears and a reduction in caliber. Other fruit quality traits were broadly unaffected, yet postharvest ethylene production was higher for AV fruit in 2022 than for the control. This study demonstrates that AV systems hold potential for pear production under temperate climates and highlights plant adaptations that make this possible. HighlightPear cultivation in agrivoltaic systems integrates renewable energy and sustainable fruit production. This study provides insights into crop yield, fruit quality, and plant adaptation towards an agrivoltaic environment.

plant biology↗

Crucial role of Juvenile Hormone receptor components Methoprene-tolerant and Taiman in sexual maturation of adult male desert locusts (Schistocerca gregaria)

The desert locust, Schistocerca gregaria, is an infamous migrating insect, generally considered to be one of the most dangerous pest species worldwide. In an area that encompasses one fifth of the Earths land surface, desert locust swarms can devastate the agricultural production. Consequently, they pose a serious threat to food security and can have a dramatic socio-economic impact. Currently (in 2020), large parts of East Africa, Southwest and South Asia are experiencing the worst desert locust plague in many decades. Exceptionally high rainfall in different regions has caused the favorable environmental conditions for very successful reproduction and population growth. To better understand the molecular mechanisms responsible for this remarkable reproductive capacity, as well as to fill existing knowledge gaps regarding the regulation of male reproductive physiology, we decided to investigate the role of the methoprene-tolerant (Scg-Met) and taiman (Scg-Tai) genes in adult male desert locusts. Methoprene-tolerant and Taiman belong to the basic helix-loop-helix/Per-Arnt-Sim (bHLH/PAS) family of transcription factors and form a complex that is responsible for transducing the Juvenile Hormone (JH) signal. So far, in vivo research has mainly focused on the role of these JH receptor components in post-embryonic development, as well as in the reproductive physiology of adult female insects. In the current study, we show that silencing these components by RNA interference strongly inhibits sexual maturation of gregarious desert locust males, thereby severely disrupting reproduction. This observation is evidenced by the absence of a yellow colored cuticle, the significant reduction in the relative weight of the testes, the inability to show mating behavior, and the drastically reduced phenylacetonitrile (PAN) pheromone levels of the treated males. In addition, we also observed significant reductions of the relative weight, as well as the relative protein content, of the male accessory glands in Scg-Met knockdown locusts. Interestingly, in these animals the size of the corpora allata (CA), the endocrine glands where JH is synthesized, was significantly increased, and a significant rise was observed in the relative transcript levels of JH acid methyltransferase (JHAMT), a rate-limiting enzyme in the JH biosynthesis pathway. Moreover, other endocrine pathways also appeared to be affected by the knockdown, as evidenced by significant changes in the levels of the transcripts coding for the insulin-related peptide and for two neuroparsins in the fat body. Our results demonstrate that JH signaling pathway components play a crucial role in male reproductive physiology. Since they are crucial for a successful reproduction, they may hold great potential as candidate targets for the design of novel strategies for locust population management. Significance statementDesert locusts can form devastating swarms that threaten the livelihood in many of the worlds poorest countries, as demonstrated by the plagues in East Africa, Southwest and South Asia that are currently covered in the news worldwide. Control of this migratory pest mainly relies on the large-scale use of neurotoxic insecticides, also affecting non-target organisms in their already fragile habitats. Therefore, the identification of novel molecular targets for the design of more sustainable and more selective pest management techniques remains of crucial importance. Potential candidate targets in this respect are pathway components that transduce signals of typical insect hormones, such as ecdysteroids and juvenile hormones. By focusing in our current study on the JH receptor components, we showed that the reproductive capacities of desert locust males can be severely inhibited in an early stage, resulting in individuals that display no mating behavior, do not produce an important pheromone and do not show the characteristic yellow color of sexually mature gregarious males. Specifically targeting molecular components of the JH signaling pathway in future, more biorational control strategies could therefore be a very successful way by which expansion of these devastating plagues might be prevented.

molecular biology↗

CYP154C5 regioselectivity in steroid hydroxylation explored by substrate and protein engineering

CYP154C5 from Nocardia farcinica is a P450 monooxygenase able to hydroxylate a range of steroids with high regio- and stereoselectivity at the 16-position. Using protein and substrate engineering based on the crystal structure of CYP154C5, an altered regioselectivity of the enzyme in steroid hydroxylation could be achieved. Thus, conversion of progesterone by mutant CYP154C5 F92A resulted in formation of the corresponding 21-hydroxylated product 11-deoxycorticosterone in addition to 16-hydroxylation. Using MD simulation, this altered regioselectivity appeared to result from an alternate binding mode of the steroid in the active site of mutant F92A. MD simulation further suggested that water entrance to the active site caused higher uncoupling in this mutant. Moreover, exclusive 15-hydroxylation was observed for wild-type CYP154C5 in the conversion of 5-androstan-3-one, lacking an oxy-functional group at C17. Overall, our data give valuable insight into the structure-function relationship of this cytochrome P450 monooxygenase for steroid hydroxylation.

biochemistry↗