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Biology subjects

Nezis, I.

Publications and source records attributed to Nezis, I..

3 recordsLinked to original sources

Glyceroglycolipids are essential for Burkholderia cenocepacia intracellular survival by preventing phagolysosome acidification

Burkholderia cenocepacia is a problematic pathogen that infects people with cystic fibrosis and often causes fatal "cepacia syndrome". B. cenocepacia infection is difficult to treat due to the high intrinsic resistance of the bacterium to antimicrobials and its ability to survive in macrophages. In this study, we uncover a hitherto unknown aspect of B. cenocepacias pathogenesis related to the formation of new glyceroglycolipids, which is required for intracellular survival. Using lipidomics, we observed that B. cenocepacia can produce three glyceroglycolipid species in phosphate deplete conditions using a PlcP-mediated lipid remodelling pathway originally discovered in soil and ocean-dwelling bacteria. While lipid remodelling as an adaptation strategy for environmental microbes to cope with the scarcity of phosphorus is known, its role in intracellular bacterial survival was not investigated. Using mammalian macrophages and Galleria mellonella larvae as infection models, we showed that the mutant unable to perform membrane lipid remodelling ({Delta}plcP) could not establish infection. Unlike the wild type bacterium, the {Delta}plcP mutant did not replicate within macrophages and failed to prevent phagosome acidification. Comparative genomics analyses showed that this PlcP pathway is conserved in all pathogenic Burkholderia that infect a variety of mammalian and plant hosts. Overall, our results indicate that membrane lipid remodelling plays an essential, yet previously overlooked, role in subverting host immunity.

microbiology↗

Deformed wings is an Atg8a-interacting protein that negatively regulates autophagy

LC3 (microtubule-associated protein 1 light chain 3, called Atg8 in yeast and Drosophila), is one of the most well-studied autophagy-related proteins. LC3 controls selectivity of autophagic degradation by interacting with LIR (LC3-interacting region) motifs also known as AIM (Atg8-interacting motifs) on selective autophagy receptors that carry cargo for degradation. Non-degradative roles of LIR motif-dependent interactions of LC3 are poorly understood. Here, we used yeast-two hybrid screening and Alpha Fold structural predictions, and we identified transcription factor Dwg (Deformed wings) as an Atg8a-interacting protein in Drosophila. Dwg-Atg8a interaction is LIR-motif dependent. We further show that Dwg is a negative regulator of autophagy. Our results provide novel insights on non-degradative roles of LIR motif dependent interactions of Atg8a and the transcriptional regulation of autophagy in Drosophila.

cell biology↗

Atg8a interacts with transcription factor Sequoia to control the expression of autophagy genes in Drosophila

Autophagy is a fundamental, evolutionarily conserved, process in which cytoplasmic material is degraded through the lysosomal pathway [1-7]. One of the most important and well-studied autophagy-related proteins is LC3 [Microtubule-associated protein 1 light chain 3, (called Atg8 in yeast and Drosophila)], which participates in autophagosome formation and autophagy cargo selection in the cytoplasm, and is one of the most widely utilized markers of autophagy [8, 9]. Despite growing evidence that LC3 is enriched in the nucleus, little is known about the mechanisms involved in targeting LC3 to the nucleus and the nuclear components it interacts with [10-13]. Here we show that Drosophila Atg8a protein, homologous to mammalian LC3 and yeast Atg8, interacts with the transcription factor Sequoia in a LIR-motif dependent manner. We show that Sequoia depletion induces autophagy in nutrient rich conditions through enhanced expression of autophagy genes. We also show that Atg8a interacts with YL-1, a component of a nuclear acetyltransferase complex, and is acetylated at position K46. Additionally, we show that Atg8a interacts with the deacetylase Sir2, which deacetylates Atg8a during starvation in order to activate autophagy. Our results suggest a mechanism of regulation of expression of autophagy genes by Atg8a, which is linked to its acetylation status and its interaction with Sequoia, YL-1 and Sir2.

cell biology↗