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Netto, W. L.

Publications and source records attributed to Netto, W. L..

2 recordsLinked to original sources

A combined experimental-computational approach uncovers a role for the Golgi matrix protein Giantin in breast cancer progression

Few studies so far have investigated the impact of different cell migration traits on tumor progression. To address this, we developed a mathematical model wherein cells migrate in two-dimensional space, divide, die or intravasate into the vasculature. Exploring a wide range of speed and persistence combinations, we find that tumor growth positively correlates with increasing speed and higher persistence. As a biologically relevant example, we focused on Golgi fragmentation induced by depletion of Giantin, a Golgi matrix protein, the downregulation of which correlates with poor patient survival. Applying the migration and invasion traits of Giantin depleted cells to our mathematical model, we predict that loss of Giantin increases the number of intravasating cells. This prediction was validated, by showing that circulating tumor cells express significantly less Giantin than primary tumor cells. Altogether, our computational model identifies cell migration traits that regulate tumor progression and uncovers a role of Giantin in breast cancer progression.

cancer biology↗

CellMAPtracer: A user-friendly tracking tool for long-term migratory and proliferating cells

Background Cell migration is a fundamental cell biological process of key importance in health and disease. Advances in imaging techniques have paved the way to monitor cells motility. An ever-growing collection of computational tools to track cells has improved our ability to analyze moving cells. However, few if any tools let the user supervise and correct cell tracks that are automatically detected. Thus, we developed CellMAPtracer, a tool to track cells in a semi-automated supervised fashion, thereby improving the accuracy and facilitating the long term tracking of migratory and dividing cells. CellMAPtracer is available with a user-friendly graphical user interface and does not require any coding or programming skills.Results We used CellMAPtracer to track fluorescently-labelled BT549 breast cancer cells. It allowed us to track dividing cells and determine the fate of the daughter cells with respect to migration speed or directionality and cell cycle length. Of note, we were able to track multi-daughter divisions, wherein a cell divides and gives rise to more than two cells. We also identified a not previously described speed change in the terminal phase of the cell cycle.Conclusion CellMAPtracer is a software tool for tracking cell migration and proliferation through a user-friendly interface that has a great potential to facilitate new discoveries in cell biology.Competing Interest StatementThe authors have declared no competing interest.View Full Text

systems biology↗