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Negi, V. D.

Publications and source records attributed to Negi, V. D..

4 recordsLinked to original sources

Distinct Regulation of Host Defences by CRISPR-Cas in Typhoidal and Non-Typhoidal Salmonella serovars

CRISPR-Cas systems are best known for their role in adaptive immunity, but emerging evidence suggests broader regulatory functions. Here, we show that the CRISPR-Cas system acts as a serovar-specific regulator of stress adaptation in Salmonella enterica, exerting opposing effects in host-restricted (S. Typhi) and broad-host-range (S. Typhimurium) serovars. In S. Typhi, CRISPR-Cas system deletion reduces acid and bile tolerance by impairing envelope integrity and repressing key stress-response regulators (envZ, cadB, phoPQ, lexA, ruvB, wecD), while increasing resistance to cationic antimicrobial peptides via pmr activation and reduced oxidative damage. Conversely, CRISPR-Cas system loss in S. Typhimurium enhances acid survival-partly through speF upregulation but increases sensitivity to antimicrobial peptides. Spacer-1 of S. Typhi CRISPR-I array as the main regulator of gene expression, and its reintroduction partially restored stress tolerance, supporting spacer-dependent control of physiological pathways. These findings establish the CRISPR-Cas system as a non-canonical, spacer-dependent regulator of stress response networks in S. enterica, revealing its contribution to the evolutionary divergence of survival strategies between S. Typhi and S. Typhimurium.

microbiology↗

Salmonella Typhimurium Vitamin B12-dependent Methionine metabolism regulates C. elegans Development

Host-microbe interactions extend beyond infection, involving microbial metabolites such as short-chain fatty acids, vitamins, and other bioactive compounds that influence host physiology and development. Using Caenorhabditis elegans, an excellent model organism for host-microbe interactions, we demonstrate that Salmonella Typhimurium significantly accelerates C. elegans growth through a vitamin B12-dependent mechanism affecting methionine metabolism. We measured the reproductive maturity of C. elegans via embryo and oocyte production in response to various Salmonella virulence factor mutants and Salmonella strains deficient in cobalamin, folate, and methionine synthesis pathways. We found that the Salmonella cbiB and metH genes are essential for rapid development in C. elegans. Moreover, the C. elegans metr-1 mutant, which lacks functional methionine synthase, did not exhibit increased reproductive maturity when fed on S. Typhimurium or E. coli OP50 supplemented with vitamin B12. However, methionine supplementation rescued this phenotype, indicating that C. elegans obtains vitamin B12 from S. Typhimurium, enhancing the methionine/S-adenosylmethionine (MET/SAM) cycle. We further observed that the C. elegans sams-1 mutant, deficient in SAM synthase, showed growth defects and reduced oocyte production when fed on Salmonella or OP50 supplemented with vitamin B12 or methionine, respectively. Thus, SAM emerges as a key link between bacterial vitamin B12 metabolism and host reproduction. Additionally, Salmonella increases vitellogenin-2 expression, reduces glutathione S-transferase activity, and decreases mitochondrial function. However, {Delta}cbiB and {Delta}metH reversed the beneficial effects of vitamin B12-dependent methionine on vitellogenesis and oxidative stress, suggesting that Salmonella promotes vitellogenesis and reduces oxidative stress through vitamin B12-dependent mitochondrial regulation, linking microbial metabolism to host development IMPORTANCEUnderstanding the interactions between hosts and pathogens is essential for improving host health. C. elegans obtains micronutrients from diet, gut microbiota, and supplements, but the contribution of microbiota in nutrient absorption is not fully understood. Bacterial metabolism may influence micronutrient status and pathogenicity, producing positive and adverse health effects on the host. This study demonstrates that pathogenic Salmonella can serve as a nutritional source for C. elegans when the two organisms coexist in the same environment. The findings suggest that, rather than being solely detrimental, Salmonella can alter the dietary habits of C. elegans, highlighting a complex interaction between the pathogen and its host. This relationship may provide insights into the ecological dynamics of microbial communities and their influence on host physiology and development.

microbiology↗

Clustered Regularly Interspaced Short Palindromic Repeats-Cas system regulates Salmonella virulence

ObjectivesInvestigating the type 1-E CRISPR-Cas-mediated regulation of Salmonella pathogenesis. MethodsWe assessed the pathogenicity of the wild-type and CRISPR-Cas knockout strains using infection models. The mechanisms were elucidated using antimicrobial assays and expression analysis. ResultsCRISPR-Cas knockout strains were defective in invasion and proliferation in intestinal epithelial cells and macrophages. However, proliferation defects were not observed in the Gp91phox-/- macrophages, suggesting the systems role in antioxidant defence. The knockout strains show hampered colonization in in-vivo infection models, possibly due to increased sensitivity against innate immune barriers like antimicrobial peptides, complement proteins and oxidative stress. The expression studies of various virulence regulators: pmr genes, anti-oxidant genes, SPI-1 and SPI-2 encoded master regulators, and effectors showed repressed expression in the knockout strains. Some of these genes could be directly regulated by the CRISPR-spacers owing to partial complementarity between the sequences. ConclusionOverall, our study shows that the CRISPR-Cas system positively regulates Salmonella pathogenesis by regulating the expression of different virulence factors.

microbiology↗

AWC mediated behavioral plasticity in C. elegans against Salmonella Typhimurium infection

Soil-dwelling nematode Caenorhabditis elegans (C. elegans) is widely found in close vicinity with different types of microbes, including bacteria, fungus, viruses, etc. However, sensing environmental stress, they often undergo a dormant state called dauer for better survival. Our current study aims to decipher chemosensory responses of worms under Salmonella Typhimurium (WT-STM) infection and how bacterial gene modulating worms chemosensory system to mediate dauer larvae development. We initially observed the olfactory preference of C. elegans toward the pathogenic WT-STM. Although prolonged exposure showed enhanced lawn occupancy of worms in fepB mutant Salmonella strain with better associative learning response compared to WT-STM counterpart. We also found strong participation of AWC neuron for sensing {Delta}fepB strain and mediating worms behavioral plasticity. Overall out study implying a relationship between chemosensory neurons and bacteria emitted signals alter worms behavioral plasticity which help us to understand complex scenario of host-pathogen interaction.

microbiology↗