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Naoi, Y.

Publications and source records attributed to Naoi, Y..

2 recordsLinked to original sources

Observation of Field Cancerization in Human Breast Tissue with Raman Hyperspectral Imaging and Artificial Neural Networks

Tissue-conserving partial mastectomy surgeries are often used to treat breast cancer, in which malignancies and surrounding margin tissues are removed. Morphologies of margin tissues are often assessed intraoperatively by a histopathologist, requiring excision and time-consuming preparation for microscopic examination. Changes in morphology often appear only after the mutation of cells involved in tumor propagation, suggesting that margins and perhaps conserved tissue may already contain cancer-converted cells prior to morphological changes. In a process known as field cancerization (FC), benign tissue surrounding a malignancy is affected by continued exposure to carcinogens, triggering cancer-promoting alterations like conversions of normal adipocytes and fibroblasts to cancer-associated adipocytes and fibroblasts. We report successful FC detection in human breast tissue samples excised during breast-conserving surgeries in human patients using Raman hyperspectral imaging and artificial neural networks (ANNs). Spectra in the images are segmented based on tissue modalities such as adipose, connective, and glandular tissues using intensities at Raman shifts of known molecules and label propagation, a method of transductive learning. ANNs that discriminate cancer from noncancer spectra return high quality (>95% accuracy) and reproducible distinction of spectra originating from cancerous tissue at high signal-to-error ratios (S/Es). Good distinction is returned in all modalities, with adipose-rich modalities returning the most reliable classifications, suggesting reliable discrimination of normal and cancer-associated adipocytes. Spectral S/Es are increased using larger spectral measurement areas, but this causes spectral mixing across different tissue modalities and significant biological variation, failing to deliver a corresponding increase in classification quality.

cancer biology↗

A novel defective recombinant porcine enterovirus G virus carrying a porcine torovirus papain-like cysteine protease gene and a putative anti-apoptosis gene in place of viral structural protein genes

Enterovirus G (EV-G) belongs to the family of Picornaviridae. Two types of recombinant porcine EV-Gs carrying papain-like cysteine protease (PLCP) gene of porcine torovirus, a virus in Coronaviridae, are reported. Type 1 recombinant EV-Gs are detected in pig feces in Japan, USA, and Belgium and carry the PLPC gene at the junction site of 2C/3A genes, while PLPC gene replaces the viral structural genes in type 2 recombinant EV-G detected in pig feces in a Chinese farm. We identified a novel type 2 recombinant EV-G carrying the PLCP gene with flanking sequences in place of the viral structural genes in pig feces in Japan. The ~0.3 kb-long upstream flanking sequence had no sequence homology with any proteins deposited in GenBank, while the downstream ~0.9 kb-long flanking sequence included a domain having high amino acid sequence homology with a baculoviral inhibitor of apoptosis repeat superfamily. The pig feces, where the novel type 2 recombinant EV-G was detected, also carried type 1 recombinant EV-G. Although the phylogenetic analysis suggested that these two recombinant EV-Gs have independently evolved, type 1 recombinant EV-G might have served as a helper virus by providing viral structural proteins for dissemination of the type 2 recombinant EV-G.

microbiology↗