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Biology subjects

Mohamed, S. A.

Publications and source records attributed to Mohamed, S. A..

2 recordsLinked to original sources

Clove-derived eugenol induces strong avoidance behaviour in the invasive fruit fly, Drosophila suzukii

The success of invasive species often relies on sensory adaptations that allow them to exploit new environments. Unlike most of its relatives, the spotted-wing drosophila (Drosophila suzukii) lays eggs in ripening fruit, making it a serious and rapidly spreading agricultural pest worldwide. Spice plants produce volatiles that repel many insects, making them a potential source of D. suzukii behavioural modulators. Here, we examined whether volatiles from clove (Syzygium aromaticum) could alter the behaviour and fitness of D. suzukii. Behavioural assays revealed strong aversion: adults avoided grapes treated with clove extract, while gravid females laid significantly fewer eggs on treated fruit in both no-choice and choice assays. Clove exposure adversely impacted fitness, resulting in slower larval growth, reduced adult weight, decreased emergence rate, and shortened lifespan. Gas Chromatography-mass spectrometry analyses identified eugenol as the predominant volatile. Consistent with this, synthetic eugenol elicited strong avoidance not only in grapes but also across various host fruits, including apple, banana, blueberry, guava, mango, orange, papaya, raspberry, strawberry, and tomato. Furthermore, molecular docking and single-sensillum recordings indicated that eugenol binds most strongly to DsuzOR88a, followed by DsuzOR69a and DsuzOR23a odorant receptors. Subsequently, cheminformatic screening of 1,000 eugenol analogues revealed several structural variants predicted to interact strongly with OR88a, offering additional candidate repellents. By combining behavioural, analytical chemistry, electrophysiological, and cheminformatic approaches, our study demonstrates that clove, through its major volatile eugenol, disrupts host use and reduces fitness in D. suzukii. These results highlight the ecological role of plant-derived repellents in insect-plant interactions and position eugenol as a promising natural compound for sustainable fruit pest management.

ecology↗

Multi Epitope Vaccine Prediction Against Aichi Virus using Immunoinformatic Approach

Aichi virus, AiV is single stranded negative sense RNA genome belonging to the genus Kobuviru, a family of Picornaviridae that causes severe gastroenteritis. There is no treatment or vaccine for it, thus the aim of this study is to design a peptide vaccine using immunoinformatic approaches to analyze the viral Protein VP1 of AiV-1 strain, to determine the conserved region which is further studied to predict all possible epitopes that can be used as a peptide vaccine. A total of 38 Aichi virus VP1 retrieved from NCBI database were aligned to determine the conservancy and to predict the epitopes using IEDB analysis resource. Three epitopes predicted as a peptide vaccine for B cell was (PLPPDT, PPLPTP, and LPPLPTP). For T cell, two epitopes showed high affinity to MHC class I (FSIPYTSPL and TMVSFSIPY) and high coverage against the whole world population. Also, in MHC class II, three epitopes that interact with most frequent MHC class II alleles (FTYIAADLR and YMAEVPVSA) with high coverage in the whole world population. For both MHCI and MHCII the T-cell peptide with the strongest affinity to the worldwide population was FSIPYTSPL.\n\nPeptide vaccine against AiV is powerfully displace the normal produced vaccines based on the experimental biochemistry tools, as it designed to handle with a wide range of mutated strains, which will effectively minimize the frequent outbreaks and their massive economical wastage consequences.

bioinformatics↗