Biology subjects

Mitchell, B. A.

Publications and source records attributed to Mitchell, B. A..

3 recordsLinked to original sources

bioRxiv2025

V1 interlaminar coherence decreases with interocular conflict

Resolving conflicting input from the two eyes is a fundamental challenge for the visual system. In the primary visual cortex (V1), such interocular conflict induces modest suppression of single neuron spiking, but the accompanying population-level dynamics remain poorly understood. Here we examined laminar multi-unit activity and interlaminar local field potential (LFP) coherence in macaque V1 during dichoptic stimulation and binocular rivalry flash suppression (BRFS). From laminar microelectrode recordings, we found that interocular conflict reliably reduces interlaminar coherence, particularly between granular and infragranular layers, suggesting altered temporal coordination across the cortical column. Strikingly, during BRFS, coherence remained reduced even when firing rates were unchanged. Moreover, interlaminar coherence is higher for perceptually dominant BRFS stimuli, indicating that coherence across V1 layers covaries with perceptual outcome in the absence of significant firing-rate differences. These findings show that the temporal dynamics of population coherence are a more stable signal of interocular conflict than spike rate modulation. SIGNIFICANCE STATEMENTThese findings suggest that V1 processes interocular conflict not only through modest rate changes but also through temporal coordination of population activity across cortical layers. Interlaminar coherence therefore offers a complementary perspective on V1s role during binocular rivalry, providing insight into population dynamics that may shape how visual signals are relayed to subsequent stages of visual processing.

neuroscience↗

bioRxiv2024

The laminar organization of cell types in macaque cortex and its relationship to neuronal oscillations

The canonical microcircuit (CMC) has been hypothesized to be the fundamental unit of information processing in cortex. Each CMC unit is thought to be an interconnected column of neurons with specific connections between excitatory and inhibitory neurons across layers. Recently, we identified a conserved spectrolaminar motif of oscillatory activity across the primate cortex that may be the physiological consequence of the CMC. The spectrolaminar motif consists of local field potential (LFP) gamma-band power (40-150 Hz) peaking in superficial layers 2 and 3 and alpha/beta-band power (8-30 Hz) peaking in deep layers 5 and 6. Here, we investigate whether specific conserved cell types may produce the spectrolaminar motif. We collected laminar histological and electrophysiological data in 11 distinct cortical areas spanning the visual hierarchy: V1, V2, V3, V4, TEO, MT, MST, LIP, 8A/FEF, PMD, and LPFC (area 46), and anatomical data in DP and 7A. We stained representative slices for the three main inhibitory subtypes, Parvalbumin (PV), Calbindin (CB), and Calretinin (CR) positive neurons, as well as pyramidal cells marked with Neurogranin (NRGN). We found a conserved laminar structure of PV, CB, CR, and pyramidal cells. We also found a consistent relationship between the laminar distribution of inhibitory subtypes with power in the local field potential. PV interneuron density positively correlated with gamma (40-150 Hz) power. CR and CB density negatively correlated with alpha (8-12 Hz) and beta (13-30 Hz) oscillations. The conserved, layer-specific pattern of inhibition and excitation across layers is therefore likely the anatomical substrate of the spectrolaminar motif. Significance StatementNeuronal oscillations emerge as an interplay between excitatory and inhibitory neurons and underlie cognitive functions and conscious states. These oscillations have distinct expression patterns across cortical layers. Does cellular anatomy enable these oscillations to emerge in specific cortical layers? We present a comprehensive analysis of the laminar distribution of the three main inhibitory cell types in primate cortex (Parvalbumin, Calbindin, and Calretinin positive) and excitatory pyramidal cells. We found a canonical relationship between the laminar anatomy and electrophysiology in 11 distinct primate areas spanning from primary visual to prefrontal cortex. The laminar anatomy explained the expression patterns of neuronal oscillations in different frequencies. Our work provides insight into the cortex-wide cellular mechanisms that generate neuronal oscillations in primates.

neuroscience↗

bioRxiv2023

Opportunity nest egg: insights on the nutritional ecology, life history and captive management of three species of kiwi (Apteryx spp.) chick from Operation Nest Egg zoo hand-rearing records.

Zoo data collected by keepers while looking after endangered species are increasingly recognised as important scientific resources. As chicks, New Zealands threatened kiwi (Apteryx spp.) are subject to the protective conservation programme Operation Nest Egg (ONE), during which growth, developmental and life history data are recorded. We have conducted comparative analyses on hand rearing records from 306 chicks, from Coromandel, Eastern and Western populations of Brown kiwi (A. mantelli), and rowi (A. rowi) and Haast tokoeka (A. australis "Haast"). We analysed chick responses to an old diet vs. a new kiwi diet, introduced in 2017. Both diets are fixed nutrient ratio mixtures. The old diet was high-protein, low-energy, while the new diet is high-fat, high-energy, with better micronutrient levels. We found Coromandel chicks, who originate from the environmentally variable K[u]aotunu Peninsula, grow the most efficiently overall on either diet, indicating they may be nutritional generalists. Western and Eastern chicks growth efficiency was intermediate, while the South Island species grew the least efficiently on either diet. Rowi chicks developed the fastest overall on either diet, while Haast tokoeka chicks developed the most slowly, especially on the new diet. Rowi chicks therefore had to eat large volumes of either diet over a short time to maintain their rapid development, while Haast chicks were required to eat large volumes, especially of the new diet, over a protracted developmental period. This situation may have led South Island chicks to over-consume one or another diet component, with likely health consequences. Neither diet was obviously superior for chick wellbeing overall, though the new diet better supported chicks that needed hand feeding. This work demonstrates different genetic populations of kiwi differ in their physiological responses to nutrition. As ONE is ongoing, tailored diets for chicks from each genetic group should be developed, and we present methods to achieve this. In our life history trait analyses, we found chick starting size (hatch mass) did not significantly influence growth efficiency across kiwi genetic group, nor did chick sex. We identified that chicks malpositioned as embryos were more likely to require extended periods of hand feeding, and that Eastern males produce more malpositioned embryos than other populations. Our study shows that effective zoo records can be used to improve captive care, to stimulate future research to refine species management practices, and to explore fundamental questions of life history evolution in wild and captive populations.

zoology↗