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Biology subjects

Mendoza, J.-V. S.

Publications and source records attributed to Mendoza, J.-V. S..

3 recordsLinked to original sources

FIRST EVIDENCE OF PRESENCE OF RALSTONIA SOLANACEARUM IN THRIPS HAWAIIENSIS (THYSANOPTERA: THRIPIDAE) IN INDANG, CAVITE

Bugtok disease remains a major bacterial constraint of cooking banana production in the Philippines and is characterized by vascular discoloration, fruit browning, and progressive decline associated with members of the Ralstonia solanacearum species complex that infect banana inflorescences and fruits. This study investigated whether insects visiting Saba banana flowers in Indang, Cavite harbor R. solanacearum, with emphasis on the possible role of Thrips hawaiiensis as a possible candidate vector under field conditions. Destructive sampling was conducted three times in a Saba-monoculturing farm with high reported bugtok incidence, targeting flowers present at the time of collection and prioritizing insects recovered directly from banana inflorescences. Field-collected insects were surface sterilized, subjected to bacterial isolation, and confirmed by PCR using RSSC-specific and phylotype-specific primers; representative thrips were then morphologically identified. Preliminary acquisition assay with infected flowers for 1 and 3 days was conducted using field collected T. hawaiiensis from a non-Bugtok infested farm in Laguna. Among the insects recovered, thrips and stingless bees (Tetragonula spp.) were the most prominent flower visitors, but only thrips yielded internal detection of R. solanacearum after surface sterilization and homogenization, supporting the presence of the pathogen within the insect body rather than simple external contamination. Morphological characters of the positive specimens were consistent with T. hawaiiensis, including a pale antennal segment III, bicolored body, paired pronotal posteroangular setae, discal setae on abdominal sternite VII, and a complete comb on abdominal tergite VIII. In preliminary acquisition tests, healthy T. hawaiiensis exposed to infected flowers acquired the pathogen at mean positivity values of 1.75 {+/-} 1.50 after 1 day and 2.67 {+/-} 4.72 after 3 days, whereas control thrips remained negative. These findings provide field-based evidence that T. hawaiiensis can acquire R. solanacearum from infected Saba flowers and should be considered in Bugtok epidemiology and integrated disease management in Luzon.

zoology↗

Comparative RNA-seq analysis of resistant and susceptible banana genotypes reveals molecular mechanisms in response to Banana bunchy top virus (BBTV)

Banana is a major fruit crop in the Philippines and remains to be a large contributor to the countrys dollar reserve. Among the main hindrances in global banana production, diseases such as Banana bunchy top disease (BBTD) caused by BBTV can bring catastrophic loss to any banana plantation. To elucidate the resistance mechanism and understand the interplay of host factors in the presence of the invading pathogen, we implemented RNA-seq-based comparative transcriptomics analyses of mock- and BBTV-inoculated resistant (wild M. balbisiana) and susceptible (M. acuminata Lakatan) banana genotypes. Similar patterns of expression for 119 differentially expressed genes (DEGs) were observed on both genotypes, representing the typical defense response of banana to BBTV. A set of 173 DEGs specific to the susceptible Lakatan banana cultivar revealed potential host factors and susceptibility mechanisms involved in successful BBTV infection. Further, differential transcriptomic analysis revealed 268 DEGs exclusive to the resistant wild M. balbisiana, unraveling insights into the complex resistance mechanisms involved in BBTV defense such as pathogen perception, phytohormone action, reactive oxygen species (ROS), hypersensitive response (HR), production of secondary metabolites and cell wall modification. The DEGs identified in this study will aid in the design of foreground markers for the precise integration of resistance genes during marker-assisted breeding programs. Furthermore, the application of these results will also enable the foreseen deployment of genome-edited banana cultivars targeting the resistance and host factor genes towards a future-proof banana industry.

genomics↗

Genetic Structure and Diversity of Banana Bunchy Top Virus (BBTV) in the Philippines

Banana bunchy top virus (BBTV) is an important disease of banana in the Philippines and in other banana-producing countries. This study was conducted to investigate the genetic structure and diversity of Philippine BBTV isolates which remain unexplored in the country. BBTV-infected plant tissues were sampled from banana-growing provinces (i.e., Cagayan, Isabela, Quirino, Batangas, Laguna, Rizal, Quezon, Palawan, Cebu, Leyte, and Davao del Sur) and the partial DNA-R gene of BBTV was sequenced. Analysis of all local BBTV isolates showed a nucleotide diversity ({pi}) of 0.00721, average number of nucleotide differences (k) of 5.51984, and haplotype diversity (hd) of 0.971. Neutrality tests using Fus Fs and Tajimas D showed significant and highly negative values which suggest an excess number of rare alleles due to recent population expansion or from genetic hitchhiking. Haplotype network and phylogenetic analyses revealed that the local BBTV isolates were closely related to Southeast Asian (SEA) group and exhibited a monophyletic clade with distinct haplotype grouping from other SEA sequences. However, some Indonesian and Indian reference sequences were also clustered within the Philippine BBTV group suggesting sequence homology. Results also showed that the local BBTV isolates may be categorized into three major haplotype groups (HA, HB, and HC) but only the HC group remained distinct upon comparison with other Philippine and SEA reference sequences. BBTV isolates from Quezon were the most diverse while isolates from Palawan displayed low genetic diversity indices and belonged only in the HC group. The assessment of the degree of variability among Philippine BBTV isolates will provide a reference towards the development of high-throughput BBTV detection systems as well as enable to devise plant breeding strategies to manage the current BBTV spread and variations.

genetics↗