Biology subjects

McCann, A. J.

Publications and source records attributed to McCann, A. J..

5 recordsLinked to original sources

bioRxiv2026

Single-molecule bouncing at a liquid interface governs presynaptic enrichment

Many cellular processes rely on accumulating highly diffusive cytoplasmic proteins to a specific location within the cell. This spatial enrichment is generally thought to rely on locally immobilizing proteins or slowing diffusion through binding and molecular crowding. Paradoxically, cytoplasmic proteins that are enriched within nerve terminals remain highly diffusive, raising questions about the mechanisms that govern presynaptic enrichment. Here, using in vivo single-molecule microscopy, we tracked the diffusion of a model cytoplasmic protein, -Synuclein (-Syn), and synaptic vesicles (SVs), in motor neuron presynapses of live Drosophila larvae. We demonstrate that -Syn undergoes rapid and frequent "bouncing" events at a presynaptic interface, locally impeding escape from the presynapse. We measured escape probabilities at the interface, and show that impeding escape, without dramatically slowing diffusion, is sufficient to govern presynaptic enrichment. The interface is liquid-like and coincides with the boundary of the SV cluster, which is a necessary scaffold for the presynaptic enrichment of -Syn. Our results provide direct evidence of interfacial reflectivity at the interface of liquid-like compartments, and that this phenomenon can govern the subcellular enrichment of proteins and small organelles at the level of individual particles.

neuroscience↗

bioRxiv2025

Transmitted alpha-synuclein extracellular vesicles downregulate axonal flux of retrograde carriers in recipient neurons

-Synuclein (-syn) is a cytosolic protein located in nerve terminals and is involved in several neurodegenerative diseases such as Parkinsons disease. Recent studies have demonstrated that -syn can be transmitted from neuron to neuron via exosomal release, thereby contributing to the propagation of -syn pathology. However, the mechanism by which -syn-containing exosomes perturb the function of recipient neurons is currently unknown. Retrograde axonal transport of carriers emanating from the presynapse is essential for neuronal survival. To determine the effect of transmitted -syn on neuronal retrograde trafficking, we used conditioned medium from -syn transfected "donor" hippocampal neurons, applied to naive (non-transfected) "recipient" neurons cultured in microfluidic chambers. Time-lapse imaging of retrograde carriers containing cholera toxin-B subunit (CTB) was then performed in these recipient neurons. Here, we show that conditioned medium from -synWT-GFP transfected donor neurons significantly downregulated the frequency of retrograde CTB carriers when applied to recipient neurons. This effect was abolished by (i) inhibiting endocytosis in recipient neurons, (ii) by blocking exosomal release from donor cells via an Hsp90-dependent mechanism, or (iii) by using conditioned medium from neurons transfected with a Parkinsons mutant (-synA30P-GFP). Whilst transmitted -syn-mEos2, -synA30P-mEos2 and mEos2 alone were detected in recipient neurons using single molecule imaging, interestingly, -synWT-mEos2 exhibited lower mobility, and periodic (190 nm) immobilisations along the axon. Our data suggest that the downregulation of vesicular trafficking by transmitted -syn does not rely on the specific release nor uptake of exosomal -syn but probably depends on its interaction with endogenous -syn following endocytosis in recipient neurons. The transmitted -syn containing extracellular vesicles therefore controls essential axonal trafficking in recipient neurons, an effect lost with the Parkinsons disease mutant -synA30P.

neuroscience↗

bioRxiv2025

NKX2-5 congenital heart disease mutations show diverse loss and gain of epigenomic, biochemical and chromatin search functions underpinning pathogenicity

Congenital heart defects (CHD) occur in [~]1% of live births, with inherited and acquired mutations and environmental factors contributing to causation. However, network perturbations in CHD remain poorly understood. We report an integrated functional-epigenomics approach to CHD, focusing on the cardiac homeodomain (HD) transcription factor NKX2-5, mutations which cause diverse heart structural and conduction defects. We selected twelve NKX2-5 CHD variants affecting different residue classes - homeodomain DNA base-contacting, backbone-contacting and helix-stabilizing, and those affecting other conserved protein:protein interaction (PPI) domains. In HL-1 cardiomyocytes, we profiled genome-wide DNA targets of NKX2-5 wild type (WT) and variants, their DNA binding affinity and specificity, PPI with known NKX2-5 cofactors and chromatin search dynamics. Variants showed diverse yet class-specific behaviours. All variants failed to bind many WT targets but retained binding to a subset of core cardiomyocyte-related targets, and bound hundreds of unique "off-targets" via changes to DNA binding site specificity, homodimerization, cofactor interactions and chromatin search functions. Our data suggest that complex residue-by-residue scale epigenomic, biochemical and chromatin search defects involving both loss-and gain-of-function contribute to CHD. These findings may inform precision molecular therapeutic approaches in patients with CHD.

genomics↗

bioRxiv2025

Hippo signalling regulates the nuclear behaviour and DNA dwell times of YAP and TEAD to control transcription

Over the past two decades, genetic and proteomic screens have enabled the discovery and elucidation of the Hippo pathway as a complex signalling network that controls tissue growth and cell fate and which is of major importance for human cancers. Despite these advances, our understanding of how Hippo signalling regulates transcription is less clear. To address this, we used live microscopy approaches to study the nuclear behaviour of the major transcription effectors of the human Hippo pathway, YAP and TEADs. Our experiments revealed that TEADs are a major determinant of YAPs nuclear biophysical behaviour, whilst YAP only has a minor influence on TEAD behaviour. Acute chemical inhibition of Hippo signalling stimulated an increase in the DNA residence time of both YAP and TEAD1. Consistently, YAP and TEAD1 bound DNA for longer periods in cells with high intrinsic YAP/TEAD activity (induced trophoblast stem cells) than in cells with low intrinsic YAP/TEAD activity (induced pluripotent stem cells). TEAD1 bound the genome on a broad range of timescales, and this is extended substantially in nuclear condensates. Finally, single molecule tracking experiments revealed that a fusion protein encoded by a cancer-associated YAP allele exhibits substantially different nuclear biophysical behaviour than either YAP or TEAD1. These live microscopy experiments reveal that Hippo signalling regulates transcription at least in part by influencing the DNA dwell times of both YAP and TEAD.

cell biology↗

bioRxiv2020

A dominant-negative SOX18 mutant disrupts multiple regulatory layers essential to transcription factor activity.

Few genetically dominant mutations involved in human disease have been fully explained at the molecular level. In cases where the mutant gene encodes a transcription factor, the dominant-negative mode of action of the mutant protein is particularly poorly understood. Here, we studied the genome-wide mechanism underlying a dominant-negative form of the SOX18 transcription factor (SOX18RaOp) responsible for both the classical mouse mutant Ragged opossum and the human genetic disorder Hypotrichosis-Lymphedema-Telangiectasia-Renal Syndrome. Combing three single-molecule imaging assays in living cells, we found that SOX18RaOp disrupts the system through an accumulation of molecular interferences which impair several functional properties of the wild-type SOX18 protein, including its chromatin-binding dynamics. The dominant-negative effect is further amplified by recruiting the interactome of its wild-type counterpart, which perturbs regulatory nodes such as SOX7 and MEF2C. Our findings explain in unprecedented detail the multi-layered process that underpins the molecular etiology of dominant-negative transcription factor function.

cell biology↗