Mace, T. | Search bioRxiv

bioRxiv2021

Genome-wide analyses reveal a strong association between LEPR gene variants and body fat reserves in ewes

Among the adaptive capacities of animals, the management of energetic body reserves (BR) through the BR mobilization and accretion processes (BR dynamics, BRD) has become an increasingly valuable attribute for livestock sustainability, allowing animals to cope with more variable environments. BRD has previously been reported to be heritable in ruminants. In the present study, we conducted genome-wide studies (GWAS) in sheep to determine genetic variants associated with BRD. BR levels and BR changes over time were obtained through body condition score measurements at eight physiological stages throughout each productive cycle in Romane ewes (n=1034) and were used as phenotypes for GWAS. After quality controls and imputation, 48,513 single nucleotide polymorphisms (SNP) were included in the GWAS. Among the QTLs identified, a major QTL associated with BR levels during pregnancy and lactation was identified on chromosome 1. In this region, several significant SNPs mapped to the leptin receptor gene (LEPR), among which one SNP mapped to the coding sequence. The point mutation induces the p.P1019S substitution in the cytoplasmic domain, close to tyrosine phosphorylation sites. The frequency of the SNP associated with increased BR levels was 32%, and the LEPR genotype explained up to 5% of the variance of the trait. These results provide strong evidence for involvement of LEPR in the regulation of BRD in sheep and highlight it as a major candidate for improving adaptive capacities.

genetics↗

bioRxiv2020

PhenoBR: a model to phenotype body condition dynamics in meat sheep

In situations of negative energy balance (NEB) due to feed scarcity or high physiological demands, body energy reserves (BR), mainly stored in adipose tissues, become the main sources of energy for ruminants. The capacity to mobilize and restore such BRs in response to different challenges is of major concern in the current context of breeding for resilience. Body condition score (BCS) is a common, practical indicator of BR variations throughout successive productive cycles, and quantitative tools for characterizing such dynamics at the individual level are still lacking. The main objective of this work was to characterize body condition dynamics in terms of BR mobilization and accretion capacities of meat sheep during their productive lifespan through a modelling approach. The animal model used in this work was the reproductive meat ewe (n = 1478) reared in extensive rangeland. Regular measurements of BCS for each productive cycle were used as the indicator of BR variations. A hybrid mathematical model and a web interface, called PhenoBR, was developed to characterize ewes BCS variations through four synthetic and biologically meaningful parameters for each productive cycle i: BR accretion rate [Formula], BR mobilization rate [Formula], plus the time of onset and the duration of the BR mobilization, [Formula] and {Delta}Ti, respectively. The model converged for all the ewes included in the analysis. Estimation of the parameters indicated the inter-individual variability for BR accretion and mobilization rates, and for the length of the mobilization period. Body reserve mobilization rates were closely correlated between productive cycles. Significant correlations between BR mobilization and accretion rates suggest that the two processes are biologically linked. Parameters kp and kb decreased as parity increased. BR mobilization rate and duration increased as litter size increased, while BR accretion rate decreased. Individual characterization of animals by these parameters makes it possible to rank them for their efficiency in the use of body reserves when facing NEB challenges. Such parameters could contribute to better management and decision-making by farmers and advisors, e.g. by adapting feeding systems to the individual characteristics of BR dynamics, or by geneticists as criteria to develop future animal breeding programs including BR dynamics for more robust and resilient animals.

physiology↗