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Lowi-Merri, T.

Publications and source records attributed to Lowi-Merri, T..

2 recordsLinked to original sources

Detailed shape characterization reveals complementary ecomorphological patterns in brain shape and size evolution across the avian radiation

Like mammals, birds have exceptionally large brains for their body sizes, which is thought to have facilitated their diversification through environmental change, and has been associated with many ecological adaptations. Although size metrics are informative and well-studied, they are limited in their ability to characterize localized neuroanatomical variation. Size and shape together can holistically capture the diversification of avian brain form, and how these changes relate to function and ecology. We employ high-density geometric morphometric (GM) shape data across 300 avian species to capture shape variation in whole brain endocasts, and compare how evolutionary patterns differ between shape and size. While ecomorphological signal is mixed across brain regions, we find that the majority of shape variation falls along an elongated-globular spectrum, where terrestrial and aquatic birds generally have anteroposteriorly elongated brains, while aerial bird brains are typically more globular. The supermajority (>90%) of endocranial shape variation is independent of evolutionary allometry, demonstrating that shape characterizes key aspects of avian neuroanatomy that are missing from volumetric data. Our results suggest that neuroanatomical diversity in birds is not driven by the dominance of any particular factors, but rather through clade-specific divergence in localized brain structures from the avian-wide allometric and ecomorphological patterns.

evolutionary biology↗

Bone and cartilage staining protocol for large avian specimens: late-stage embryonic emu (Dromaius novaehollandiae) and adult chickens (Gallus gallus)

The ability to consistently and clearly visualize discrete anatomical parts of a specimen is crucial for biological research. For skeletal tissues, a classic and widely adopted technique uses a combination of Alizarin red for bone and Alcian or toluidine blue stains for cartilage. Published protocols for these stains have generally been optimized for small or prenatal specimens; thus, leaving out applications to relatively large specimens including somatically mature specimens and embryos of large-bodied taxa. Here, we present a newly refined, detailed protocol, accompanied with photographs, for clearing extraneous tissue and staining bone and cartilaginous structures optimized for larger avian specimens, including adult domestic chicken (Gallus gallus domesticus) and late-stage, embryonic emu (Dromaius novaehollandiae). The latter exhibit relatively mature soft tissue, including skeletal muscles, compared to those of late-stage embryos of small vertebrate taxa such as domestic chicken and mice. We found through our experiments that the combined Alcian blue and Alizarin red staining works best on freshly frozen specimens compared to those fixed in formalin and effective clearing and staining was possible without the use of tissue digestion reagents, such as trypsin and pancretin. The central aim of our work is to offer a step-by-step guide that provides researchers to consistently and effectively stain skeletal tissues in larger vertebrate specimens, allowing investigation of skeletal tissues at broader developmental and taxonomic scales.

zoology↗