Search bioRxiv⌕ Search

Biology subjects

Lo, M. M.

Publications and source records attributed to Lo, M. M..

2 recordsLinked to original sources

How fast can PPRV spread? Analyzing the results of an experimental PPRV infection of goats equipped with Ultra-WideBand sensors

Peste des Petits Ruminants (PPR) is a highly contagious disease affecting goats and sheep. The speed and extent of its spread depend on contact patterns and the viruss intrinsic characteristics. To estimate propagation speed and the role of inter-individual patterns, we analyzed the results of a series of 12 experimental infections conducted in five different sessions, involving six or seven goats in a secured stable. In each experiment, one animal was inoculated with the PPR strain and placed in contact with the other naive animals. All the animals were equipped with Ultra-WideBand sensors to collect inter-individual distance data. The duration of this phase varied from 1 to 48 hours across the experiments. Afterwards, the animals were isolated and monitored for three to five weeks. Temperature, symptoms, nasal and ocular discharges, and blood samples were routinely collected to detect the presence of the virus. Using Bayesian statistical analysis, data on inter-individual distances, and health status were analyzed to estimate R0, the incubation period, and PPRV transmissibility. The latter was used to estimate the exposure period, i.e., the minimum amount of time for a naive animal to become infected. Of the 70 naive animals exposed to the virus, 18 were infected. R0 was estimated to be around 4.3 or 8.6, depending on the infectious period value. The incubation period was estimated to be around 16.3 days (95% CI: 12.6-23.3 days). The exposure time varies greatly depending on the density, ranging from nearly two days at low density to around four hours at high density. Large gatherings of animals, such as at livestock markets, could greatly facilitate the spread of PPRV. Furthermore, the long incubation period coupled with livestock mobility could favor the virus geographical dissemination on a large scale. Author summaryPPR is an infectious disease that is transmitted directly and affects goats and sheep. Since its discovery in the Ivory Coast in 1942, the PPR virus has spread worldwide, reaching China in 2010 and Europe in 2018. Despite the fact that PPR poses a huge threat to the lives of small ruminants and the livelihoods of smallholders, more research is needed into its epidemic potential and transmission speed. Here, we used a combined approach of experimental infections and contact tracing with UWB devices to estimate the probability of transmission of a specific PPRV strain, and to determine the minimum exposure time required for an animal to become infected. Our results indicate that reducing the average distance between animals by a factor of four could reduce exposure time tenfold, indicating a much higher risk for high-density herds compared to roaming ones. Coupled with new estimates of R0 and incubation time inferred from data analysis, our work sheds light on the danger posed by PPR. These informations are valuable to veterinarians and policymakers, to better assess the risk of introduction, spread, and impact of PPR, to implement timely and effective interventions.

animal behavior and cognition↗

Comparative study of two Rift Valley fever virus field strains circulating in Mauritania in 2010 and 2013 reveals the high virulence of the MRU25010-30 strain isolated from camel

Rift Valley fever (RVF) is one of the major viral arthropod-borne diseases in Africa. In recent decades, RVF virus (RVFV), the causative agent of RVF, has been responsible for multiple outbreaks in West Africa with important consequences on human and animal health. In particular, an outbreak occurred in 2010 after heavy rainfalls in the desertic region of Adrar, Mauritania. It was characterized by the appearance of severe clinical signs among dromedary camels. Another one occurred in 2013-2014 across Senegal and the southern part of Mauritania. In this study, we characterized two RVFV field strains isolated during these two outbreaks. The first strain, MRU25010-30, has been isolated in camel (2010) while the second, MRU2687-3, was isolated in goat (2013). By deep-sequencing and rapid amplification of cDNA-ends by polymerase chain reaction (RACE-PCR), we successfully sequenced the complete genome of these two RVFV strains as well as the reference laboratory strain ZH548. Phylogenetic analysis shows that the two field viruses belong to two different RVFV genetic lineages. Moreover, we show that MRU25010-30 replicates more efficiently in various in vitro cell culture models than MRU2687-3 and ZH548. In vivo, MRU25010-30 caused rapid death of BALB/c mice and proved to be more virulent than MRU2687-3, regardless of the route of inoculation (subcutaneous or intranasal). The virulence of MRU25010-30 is associated with a high viral load in the liver and serum of infected mice, while the death of mice infected with MRU2687-3 and ZH548 correlates with a high viral load in the brain. Altogether, the data presented in this study provide new avenues to unveil the molecular viral determinants that modulate RVFV virulence and replication capacity Author SummaryRift Valley fever is an arboviral zoonosis caused by Rift Valley fever virus (RVFV) belonging to the Phlebovirus genus. It poses a major risk for causing a public and animal health emergency and is a significant economic burden in many African countries. To date, our knowledge of the impact of RVFV genetic diversity on its virulence, replicative capacities and transmission by mosquitoes is limited. In this study, we fully sequenced two RVFV strains isolated in Mauritania during two distinct outbreaks (2010 and 2013) and show that they were genetically distant. Interestingly, we show that one of the strains (MRU25010-30) is able to replicate in vitro more efficiently than the other (MRU2687-3). Additionally, we show that high levels of viremia and viral load in the liver are associated with rapid death in BALB/c mice infected with MRU25010-30, whereas mice infected by MRU2687-3 tend to die later with high viral load in the brain. In conclusion, our study confirms that RVFV strains from distinct genetic lineages have different phenotypic characteristics such as virulence and replication capacity. These data provide a strong basis for further studies aimed at identifying the viral genetic determinants responsible for the observed phenotypes.

microbiology↗