Biology subjects

Lin, H.-W.

Publications and source records attributed to Lin, H.-W..

2 recordsLinked to original sources

bioRxiv2026

AetherXeno: an allele-resolved receptor-occupancy atlas for regulatory pharmacogenomics

Motivation: Interpreting noncoding pharmacogenomic variants requires identifying the regulatory program that may be perturbed and the direction of the effect, information not supplied by population frequency or general regulatory annotations. Results: We developed AetherXeno, an allele-resolved atlas that scores all substitutions across 8,691 experimentally supported elements for PXR, FXR and AhR and connects 17.27 million variants to evidence matched by exact allele. Across the six paired comparisons, the gain in Spearman correlation ranged from 0.039 to 0.334. Every regional bootstrap interval excluded zero. Homology exclusion preserved these findings, while motif core and liver expression enrichment supported biological organization of the score landscape. The browser, programmatic interface and bulk files expose the same versioned records from individual variants to cohort analyses. Availability and implementation: The web resource is available at https://aetherxeno.org and the versioned data at doi:10.5281/zenodo.20753827.

bioinformatics↗

bioRxiv2021

CREB repressor in mushroom body enhances Drosophila LTM formation

Long-term memory (LTM) requires learning-induced synthesis of new proteins allocated to specific neurons and synapses in a neural circuit. Not all learned information, however, becomes permanent memory. How the brain gates relevant information into LTM remains unclear. In Drosophila adults, a single training session in an olfactory aversive task is not sufficient to induce protein synthesis-dependent LTM. Instead, multiple spaced training sessions are required. Here, we report that initial learning induces neural activity in the early /{beta} subset of Kenyon cells of the mushroom body (MB), and output from these neurons inhibits LTM formation. Specifically in response to spaced training, Schnurri activates CREBB expression which then appears to suppress the inhibitory output from MB. One training session can enhance LTM formation when this inhibitory effect is relieved. We propose that learning-induced protein synthesis and spaced training-induced CREBB act antagonistically to modulate output from early /{beta} MB neurons during LTM formation.

neuroscience↗