Biology subjects

Lesman, A.

Publications and source records attributed to Lesman, A..

4 recordsLinked to original sources

bioRxiv2024

The growth-driven penetration strategy of plant roots is mechanically more efficient than pushing

Plant roots are considered highly efficient soil explorers. As opposed to the push-driven penetration strategy commonly used by many digging organisms, roots penetrate by growing, adding new cells at the tip, and elongating over a well-defined growth zone. However, a comprehensive understanding of the mechanical aspects associated with root penetration is currently lacking. We perform penetration experiments following Arabidopsis thaliana roots growing into an agar gel environment, and a needle of similar dimensions pushed into the same agar. We measure and compare the environmental deformations in both cases by following the displacement of fluorescent beads embedded within the gel, combining confocal microscopy and Digital Volume Correlation (DVC) analysis. We find that deformations are generally smaller for the growing roots. To better understand the mechanical differences between the two penetration strategies we develop a computational model informed by experiments. Simulations show that, compared to push-driven penetration, grow-driven penetration reduces frictional forces and mechanical work, with lower propagation of displacements in the surrounding medium. These findings shed light on the complex interaction of plant roots with their environment, providing a quantitative understanding based on a comparative approach.

biophysics↗

bioRxiv2024

Bio-electricity production from Fibroblasts and their cultivation media.

The recent understanding of the critical future damage that might happen on earth by climate change has urged scientists to initiate new creative ideas for clean energy technologies that will reduce carbon emissions. A promising approach is the utilization of living cells as electron donors in bio-electrochemical cells (BECs). This concept has been intensively studied for micro-organisms such as non-photosynthetic bacteria, cyanobacteria, and microalgae, but not for mammalian cells. In this work, we report for the first-time integrating live fibroblast cells in a BEC to produce electrical current that is about 3 times higher than intact micro-organisms. Furthermore, we apply 2D-fluorescence and electrochemical measurements to show that like in micro-organisms based BECs, NADH and flavins play a role in the electron mediation between the cells and the anode. Finally, we show that the cultivation medium of fibroblasts also consists of redox species that may produce dark and photocurrent.

bioengineering↗

bioRxiv2022

Probing Local Force Propagation in Tensed Fibrous Gels

Fibrous hydrogels are a key component of soft animal tissues. They support cellular functions and facilitate efficient mechanical communication between cells. Due to their nonlinear mechanical properties, fibrous materials display non-trivial force propagation at the microscale, that is enhanced compared to that of linear-elastic materials. In the body, tissues are constantly subjected to external loads that tense or compress them, modifying their micro-mechanical properties into an anisotropic state. However, it is unknown how force propagation is modified by this isotropic-to-anisotropic transition. Here, we directly measure force propagation in tensed fibrin hydrogels. Local perturbations are induced by oscillating microspheres using optical tweezers. We use both 1-point and 2-point microrheology to simultaneously measure both the shear modulus and force propagation. We suggest a mathematical framework to quantify anisotropic force propagation trends. We show that force propagation becomes anisotropic in tensed gels, with, surprisingly, stronger response to perturbations perpendicular to the axis of tension. Our results suggest that under external loads, there are favoured directions of mechanical communication between cells in a tissue. Importantly, we also find that external tension increases the range of force transmission by altering the power-law exponent governing the decay of oscillations with distance from the perturbation. We end with a discussion of possible implications and future directions for research.

biophysics↗

bioRxiv2020

Quantifying the dynamics of long-range cell-cell mechanical communication

Cells sense, manipulate and respond to their mechanical microenvironment in a plethora of physiological processes, yet the understanding of how cells transmit, receive and interpret environmental cues to communicate with distant cells is severely limited due to lack of tools to quantitatively infer the complex tangle of dynamic cell-cell interactions in complicated environments. We present a computational method to systematically infer and quantify long-range cell-cell force transmission through the extracellular matrix (cell-ECM-cell communication) by correlating ECM remodeling fluctuations in between communicating cells and demonstrating that these fluctuations contain sufficient information to define unique signatures that robustly distinguish between different pairs of communicating cells. We demonstrate our method with finite element simulations and live 3D imaging of fibroblasts and cancer cells embedded in fibrin gels. While previous studies relied on the formation of a visible fibrous band extending between cells to inform on mechanical communication, our method detected mechanical propagation even in cases where visible bands never formed. We revealed that while contractility is required, band formation is not necessary, for cell-ECM-cell communication, and that mechanical signals propagate from one cell to another even upon massive reduction in their contractility. Our method sets the stage to measure the fundamental aspects of intercellular long-range mechanical communication in physiological contexts and may provide a new functional readout for high content 3D image-based screening. The ability to infer cell-ECM-cell communication using standard confocal microscopy holds the promise for wide use and democratizing the method.

cell biology↗