Search bioRxiv⌕ Search

Biology subjects

Lacomme, C.

Publications and source records attributed to Lacomme, C..

2 recordsLinked to original sources

Influence of anthropogenic environments on the activity patterns and vigilance of Cape chacma baboons (Papio ursinus ursinus) in the Garden Route, South Africa

Anthropogenic activities shape animals time allocation and risk perception, yet its immediate behavioural impacts on primate species remain poorly quantified. In the present study, variation in activity budgets and vigilance were analysed in three Cape chacma baboon (Papio ursinus ursinus) troops inhabiting contrasting anthropogenic environments in South Africas Garden Route: Madiba (in a peri-urban campus), North (in an intermediate area), and Outeniqua (in a more rural area). From March to June 2024, a total 84 h of observations were recorded yielding 343 scan samples, and modelled behaviour as a function of troop and environmental covariates (weather, habitat openness, car and human presence). Feeding dominated overall time allocation (35.4%), with no whole-budget differences among troops, but behaviour-specific contrasts emerged. Outeniqua troop inhabiting the more rural area relied significantly less on human-derived foods than Madiba and showed less running than both Madiba and North. In addition, level-3 vigilance (active/intense scanning) was higher in the troops frequenting more anthropogenic environments (Madiba, North) than in Outeniqua, suggesting that vigilance is a particularly sensitive response to human exposure. Finally, habitat openness was negatively associated with affiliative interactions, and car presence was negatively associated with resting. These results provide partial support for hypothesised disturbance effects, with shifts in behavioural sub-categories without overall budget change, clarifying how anthropogenic disturbance can restructure primate time allocation and risk perception. Such immediate behavioural responses should offer actionable insight for evidence-based conservation and human-baboon conflict mitigation.

animal behavior and cognition↗

Emergence of a novel potato leafroll virus variant in Scotland and its genetic modulation by aphid and tuber transmission.

Potato leafroll virus (PLRV) is a major pathogen affecting potatoes worldwide. Since 2018, PLRV incidence increased in Scottish potato crops. Deep sequencing of PLRV in Scottish potato plants revealed the prevalence of a novel PLRV type which became predominant in 2023, displacing the phylogenetically distinct variants that have been present in the region since at least 1989. Analysis of the infection dynamics of the cDNA clone-derived PLRV isolates in potato plants indicated that the novel PLRV may accumulate to higher levels compared to the historic one. Analysis of the genetic diversity of PLRV in early and late field generations (FGs) of seed potatoes showed a significantly reduced genetic diversity of the PLRV structural genes in the early FGs, compared to the late FGs, while divergency of the non-structural genes remained similar across all FGs. Considering that late FGs are more likely to be infected with PLRV via tuber transmission, and early FGs via aphid transmission, these findings suggest that aphid transmission imposes a genetic bottleneck on the structural genes of PLRV, but not on its non-structural genes.

microbiology↗