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Biology subjects

Kumar, B. R.

Publications and source records attributed to Kumar, B. R..

2 recordsLinked to original sources

Towards a Physiological Scaling Law: Model Quality vs. Cohort Size for Stochastic Sequence Data

Scaling laws help determine the optimal data size for training large models but are established in domains where the target is deterministic. Physiological signals are different: heartbeat sequences are stochastic, so part of the error is irreducible even with large amounts of data. Metrics such as MAE do not account for non-deterministic behavior, and therefore assessing scaling requires evaluating distributional calibration (measuring how well predicted probability densities capture true conditional characteristics). We formulate a scaling law metric(n) = E + A n- and evaluate it with five metrics: accuracy (MAE, RMSE), distributional calibration (KS distance, goodness-of-fit), and training objective (negative log loss) using a neural temporal point process trained on a cohort of four-ECG datasets. The law fits all five metrics. While point accuracy is near saturation at n = 183, KS distance and goodness-of-fit improve by 6% and 12% respectively when extrapolated to 10,000 subjects, showing that scaling decisions in stochastic domains must be guided by distributional calibration rather than point accuracy.

physiology↗

Lognormal Neural Point Process Models for Interpretable Heartbeat Dynamics

Neural temporal point processes (NTPPs) are powerful tools for modeling sequences of timestamped events with statistical temporal structure. Density-based NTPPs, in particular, are an interesting opportunity to merge the universal function approximation capability of neural networks with a defined statistical model in a way that has many potential applications. We demonstrate one such application to heartbeat dynamics, a physiologic point process. We specifically apply a lognormal mixture NTPP to compute instantaneous estimates of the mean and standard deviation of beat-to-beat intervals. We compare our results to the state of art (Barbieri et al.) point process model for heartbeat dynamics, which uses a more physiologically rigorous inverse Gaussian model. We find that the NTPP model maintains reasonable accuracy while improving upon robustness to noise.

physiology↗