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Biology subjects

Kui, L.

Publications and source records attributed to Kui, L..

3 recordsLinked to original sources

LCN2+ Astrocytes Mark a Pro-inflammatory Astrocyte State Associated with Secondary Brain Injury After Cerebral Venous Thrombosis

Cerebral venous thrombosis (CVT) is a cerebrovascular disorder with unique pathophysiological characteristics. Although the mortality rate during the acute phase has declined in recent years, the cellular mechanisms underlying secondary brain injury and long-term neurological dysfunction after CVT remain poorly understood [1,2]. In this study, we performed single-cell RNA sequencing of brain tissues from a murine CVT model to systematically characterize the cellular landscape following CVT and identified a reactive astrocyte state characterized by high expression of Lcn2. This astrocyte subset was markedly enriched after CVT. Notably, despite the absence of significant changes in the overall proportion of astrocytes, this population exhibited enhanced inflammatory/cytokine response signatures, ferroptosis-related stress responses, and vascular-immune microenvironment remodeling programs, suggesting that the major alteration of astrocytes after CVT is driven primarily by state transition rather than cellular expansion. Pseudotime trajectory analysis further demonstrated that Lcn2+ astrocytes were predominantly localized at the late stage of the trajectory and displayed sustained upregulation of multiple inflammation- and stress-associated genes, supporting their characterization as a late-stage reactive astrocyte state under CVT conditions. Cell-cell communication analysis revealed extensive predicted interactions between this subset and myeloid cells, vascular-associated cells, as well as neuronal/synaptic populations, indicating its potential involvement in dynamic remodeling of the lesion microenvironment. Cross-model integration analysis further revealed the presence of Lcn2-high astrocytes in the middle cerebral artery occlusion (MCAO) model; however, their expression breadth and intensity were generally weaker than those observed in CVT, suggesting that this cellular state may represent a common reactive framework following cerebrovascular obstruction, while being particularly pronounced in CVT. Furthermore, genetic deletion of LCN2 alleviated CVT-induced brain tissue injury in vivo, providing functional evidence supporting the detrimental role of the LCN2-associated pathological state. Collectively, our study identifies a distinct Lcn2-high reactive astrocyte state after CVT that is closely associated with inflammatory amplification, ferroptosis-related stress, and microenvironmental remodeling. These findings provide new cellular insights into the mechanisms underlying secondary brain injury after CVT and highlight potential targets for therapeutic intervention.

neuroscience↗

NLRP3 inflammasome contributes to host defense against Talaromyces marneffei infection

Talaromyces marneffei is an important thermally dimorphic pathogen causing disseminated mycoses in immunocompromised individuals in southeast Asia. Previous study has suggested that NLRP3 inflammasome plays a critical role in antifungal immunity. However, the mechanism underlying the role of NLRP3 inflammasome activation in host defense against T. marneffei remains unclear. We show that T. marneffei yeasts but not conidia induce potent IL-1{beta} response, which is differentially regulated in discrete immune cell types. Dectin-1/Syk signaling pathway mediates pro-IL-1{beta} production, and NLRP3 inflammasome is activated to trigger the processing of pro-IL-1{beta} into IL-1{beta}. The activated NLRP3 inflammasome partially promotes Th1 and Th17 immune responses against T. marneffei yeasts. In vivo, mice with NLRP3 or caspase-1 deficiency exhibit higher mortality rate and fungal load compared to wild-type mice. Herein, our study provides the first evidence that NLRP3 inflammasome contributes to host defense against T. marneffei infection, which may have implications for future antifungal therapeutic designs.

microbiology↗

High-quality genome assembly and high-density genetic map of asparagus bean

Asparagus bean (Vigna. unguiculata ssp. sesquipedialis), known for its very long and tender green pods, is an important vegetable crop broadly grown in the developing countries. Despite its agricultural and economic values, asparagus bean does not have a high-quality genome assembly for breeding novel agronomic traits. In this study, we reported a high-quality 632.8 Mb assembly of asparagus bean based on the whole genome shotgun sequencing strategy. We also generated a high-density linkage map for asparagus bean, which helped anchor 94.42% of the scaffolds into 11 pseudo-chromosomes. A total of 42,609 protein-coding genes and 3,579 non-protein-coding genes were predicted from the assembly. Taken together, these genomic resources of asparagus bean will facilitate the investigation of economically valuable traits in a variety of legume species, so that the cultivation of these plants would help combat the protein and energy malnutrition in the developing world.

genomics↗