Biology subjects

Kraus, S.

Publications and source records attributed to Kraus, S..

10 recordsLinked to original sources

bioRxiv2026

Cellular heterogeneity in the response of Burkholderia thailandensis to antibiotics and phages in synthetic spatial refuges

Understanding the complex interactions between phage, antibiotics and bacteria is vital for the development of rationale phage-antibiotic therapies. These interactions have traditionally been investigated via bulk assays, thus masking eventual cellular heterogeneities and the impact of spatial refuges on phage and antibiotic efficacy. Using microfluidics-based time-lapse microscopy, we reveal large phenotypic heterogeneity in the response of Burkholderia thailandensis to both the bacteriophage {Phi}Bp-AMP1 and sub-inhibitory concentrations of two selected antibiotics ciprofloxacin and trimethoprim. We discover that simultaneous exposure to ciprofloxacin and phage decreases the size of individual B. thailandensis cells, whereas phage and trimethoprim together slow down cell doubling. Exposure to ciprofloxacin also causes extended phage lysis of B. thailandensis which is preceded by a distinguishable pause in cell elongation, whereas exposure to trimethoprim constrains lysis. As a consequence, exposure to ciprofloxacin further hinders the growth of B. thailandensis in the presence of phage, whereas exposure to trimethoprim enhances growth in the presence of phage. These findings help understand the effects of the interactions between antibiotics and phage on bacterial subpopulations in spatial refuges that are notoriously difficult to treat with antibiotics.

microbiology↗

bioRxiv2026

Low-Dose Interleukin-2 Resolves Stress-Induced Chronic Sensitization Independent of Opioid Receptor Signaling

Stress is a common trigger of headache and widespread somatic pain. Repeated exposure to stress establishes latent sensitization that is tonically suppressed by endogenous inhibitory systems. Using brain-penetrating and peripherally restricted receptor antagonists in a mouse model of repetitive restraint stress, we systematically identified these protective pathways. Peripheral kappa opioid receptors as well as GABA type A and type B (GABAA and GABAB) receptors, alongside central opioid and cannabinoid signaling, actively suppress headache-related facial mechanical hypersensitivity in stressed mice. Blocking any pathway quickly reinstated cephalic allodynia. Peripheral opioid and GABAA receptor signaling also inhibited stress-induced latent sensitization on hindpaw. In contrast, depletion of anti-inflammatory regulatory T (Treg) cells prolonged facial but not hindpaw sensitization, suggesting that Tregs preferentially limit stress-induced chronic headache. Next, we administered low-dose interleukin-2 (LD-IL-2) to stressed mice to preferentially expand and activate Treg cells. Following LD-IL-2 treatment, neither subthreshold pain triggers nor blockade of endogenous inhibitory pathways reinstated cephalic or hindpaw allodynia in either sex, indicating elimination of stress-induced sensitization. Mechanistically, LD-IL-2 acted through Treg cells to recruit multiple peripheral cytokine pathways without engaging endogenous opioid, GABA, or cannabinoid receptor signaling. Notably, LD-IL-2 was more effective than anti-CGRP (calcitonin gene-related peptide) therapy in preventing headache-related chronic sensitization in stressed mice. Collectively, these findings reveal multiple central and peripheral pathways that act concertedly to mask stress-induced latent sensitization and strongly support further evaluation of LD-IL-2 as a novel treatment for stress-induced headache and widespread pain with a distinct mechanism of action.

neuroscience↗

bioRxiv2026

Nutritional responses of bumblebees to thermal stress

Extreme climatic events impose considerable stress on organisms with consequences for key ecological interactions such as pollination. Because temperature directly affects metabolic processes, heat variations may also importantly influence the nutritional needs and feeding choices of animals. Here, we studied the effects of thermal stress on the nutritional choices and performances of bumblebees, using a 3D nutritional geometry design. At optimal temperature for colony development (30{degrees}C), bees successfully balanced carbohydrate, protein, and lipid collection, at levels beneficial for body weight and survival. Under cold stress (20{degrees}C), bees reduced their overall nutrient collection while selecting proportionally more carbohydrates, thereby prioritizing survival over weight gain. Under heat stress (35{degrees}C), nutrient balancing was disrupted and survival dropped. Notably however, across all temperatures, bees maintained stable lipid collection while flexibly adjusting the amount of carbohydrates and proteins, suggesting strong constraints on lipid regulation. Given the pivotal role of bees for pollination, identifying how their nutritional needs change in response to climatic conditions is of prior importance for food safety and the conservation of terrestrial ecosystems.

animal behavior and cognition↗

bioRxiv2026

Long-term consequences of fostering: Single egg fostering leads to decreased survival in zebra finch females, but not in males

Cross-Fostering, i.e., the exchange of eggs or hatchlings, is a widely used technique, to disentangle genetic from environmental effects or to manipulate the clutch size. In most bird species, this manipulation is easily accepted by the social parents, leading to the conclusion that fostering has no detrimental effect. Using a dataset of four cohorts (N=298) of zebra finches (Taeniopygia castanotis), in which we fostered routinely a single egg into another nest of zebra finches, we explored potential short- and long-time effects of fostering. Noteworthy, these experiments were not designed to test this hypothesis. The objective of the egg fostering experiments was to test for parental recognition (Caspers et al. 2017) and mate choice decisions (Goluke 2018). Consequently, the aim of the present study is purely explorative. Our study confirmed previous findings that fostering has no short-term effects on the morphology and growth rates of the chicks, neither in males nor in females. However, we found that fostering has a sex-specific long-term effect. Females originating from fostered eggs had a significantly reduced lifespan compared to those from non-fostered eggs. Conversely, the lifespan of fostered males was similar to that of non-fostered males. All birds were housed in large groups, experiencing the same conditions after nutritional independence (day 35). Therefore, we can only speculate that fostering might result in early developmental stress, which may affect the individual fitness of females later in life, ultimately leading to shorter lifespans.

animal behavior and cognition↗

bioRxiv2025

Hierarchical processing of sensory information across topographically organized thalamocortical-like circuits in the zebrafish brain

Thalamocortical projections contribute to the spatial organization and functional hierarchies of the mammalian cortex. Primary sensory cortices receive topographically segregated information from first-order thalamic nuclei, which process distinct sensory modalities. In contrast, higher-order cortical regions integrate information from multiple information channels. While such hierarchical processing and integration of information is the foundation for neural computations in the mammalian cortex, the fundamental principles of thalamocortical computations in non-mammalian vertebrates remains unexplored. The zebrafish pallium, located in the dorsal telencephalon, is regarded as the homolog of the mammalian cortex. However, it remains unclear how the zebrafish pallium receives and processes sensory information, and how the architecture and function of these processes compare to the thalamocortical circuits in other vertebrates. Using anatomical tracing, electrophysiological circuit mapping, and in vivo Ca2+ imaging, we revealed a thalamocortical-like pathway in the zebrafish brain. We found that the preglomerular nucleus (PG) is the primary source of visual and mechano-vibrational information to the zebrafish pallium. We demonstrated that PG neurons and their pallial projections exhibit sensory-specific and topographically organized responses. In contrast, the sensory responses of pallial neurons display multiple layers of topographically organized hierarchies, ranging from simple sensory-specific responses to multimodal and coincidence-detecting nonlinear responses. Notably, we observed a progressive increase in the complexity of sensory computations, which is organized topographically along the posterior-anterior axis of the zebrafish pallium. Collectively, our results suggest that hierarchical sensory processing across topographically organized pallial regions is a conserved functional feature of the vertebrate pallium.

neuroscience↗

bioRxiv2024

IntelliR: A comprehensive and standardized pipeline for automated profiling of higher cognition in mice

In the rapidly evolving field of rodent behavior research, observer-independent methods facilitate data collection within a social, stress-reduced, and thus more natural environment. A prevalent system in this research area is the IntelliCage, which empowers experimenters to design individual tasks and higher cognitive challenges for mice, driven by their motivation to access reward. The extensive amount and diversity of data provided by the IntelliCage system explains the growing demand for automated analysis among users. Here, we introduce IntelliR, a standardized pipeline for analyzing raw data generated by the IntelliCage software, as well as novel parameters including the cognition index, which enables comparison of performance across various challenges. With IntelliR, we provide the tools to implement and automatically analyze 3 challenges that we designed, encompassing spatial, episodic-like, and working memory with their respective reversal tests. Using results from 3 independent control cohorts of adult female wildtype mice, we demonstrate their ability to comprehend and learn the tasks, thereby improving their proficiency over time. To validate the sensitivity of our approach for detecting cognitive impairment, we used adult female NexCreERT2xRosa26-eGFP-DTA mice after tamoxifen induced diphtheria toxin-mediated ablation of pyramidal neurons in cortex and hippocampus. We observed deterioration in learning capabilities and cognition index across several tests. IntelliR can be readily integrated into and adapted for individual research, thereby improving time management and reproducibility of data analysis. HIGHLIGHTSO_LIIntelliR is a standardized pipeline for analyzing raw data of IntelliCage software. C_LIO_LIDomains include spatial, episodic-like, and working memory with reversals. C_LIO_LIWT mice (3 cohorts) comprehend, learn and improve proficiency over time. C_LIO_LICognition index permits comparison of performance across cognitive domains. C_LIO_LIMice with ablation of pyramidal neurons decline mainly in working memory. C_LI

animal behavior and cognition↗

bioRxiv2023

Phage-induced efflux down-regulation boosts antibiotic efficacy

The interactions between a virus and its host vary in space and time and are affected by the presence of molecules that alter the physiology of either the host or the virus. Determining the molecular mechanisms underpinning these interactions is paramount for predicting the fate of bacterial and phage populations and for designing rational phage-antibiotic therapies. We study the interactions between stationary phase Burkholderia thailandensis and the phage {Phi}Bp-AMP1. Although heterogeneous genetic resistance to phage rapidly emerges in B. thailandensis, the presence of phage enhances the efficacy of three major antibiotic classes, the quinolones, the beta-lactams and the tetracyclines, but antagonizes tetrahydrofolate synthesis inhibitors. We discovered that enhanced antibiotic efficacy is underpinned by reduced antibiotic efflux in the presence of phage. This new phage-antibiotic therapy allows for eradication of stationary phase bacteria, whilst requiring reduced antibiotic concentrations, which is crucial for treating infections in sites where it is difficult to achieve high antibiotic concentrations.

microbiology↗

bioRxiv2023

Synergistic olfactory processing for social plasticity in desert locusts

1Desert locust plagues threaten the food security of millions. Central to their formation is crowding-induced social plasticity from solitarious to gregarious phenotypes. We investigated the impact of population density changes on locusts foraging choices and their neurobiology by examining how relevant food and social odors are coded in the antennal lobe. Our analysis shows that gregarious locusts are highly attentive to social cues during foraging, with olfaction playing an essential role. Using calcium imaging, we show that corresponding odors are encoded by projection neurons, revealing a stable combinatorial response map. Transient dynamics in the glomeruli converge into temporally evolving response motifs in the somata that differ between gregarious and solitarious insects. The dynamics of response motifs facilitate a crowding-dependent synergy between olfactory processing of food-related and social odors. Our study demonstrates the effectiveness of calcium imaging for locust olfaction, suggesting a crowding-induced adaptation to enhance food detection in swarms. 2 TeaserIn dense swarms, desert locusts optimize foraging efficiency by exhibiting an enhanced olfactory response to food odors.

neuroscience↗

bioRxiv2022

Supplementation in vitamin B3 counteracts the negative effects of tryptophan deficiencies in bumble bees

Increasing evidence highlights the importance of diet content in 9 essential amino acids for bee physiological and behavioral performance. However, the tenth essential amino acid, tryptophan, has been overlooked as its experimental measurement requires a specific hydrolysis. Tryptophan is the precursor of serotonin and vitamin B3, which together modulate cognitive and metabolic functions in most animals. Here, we investigated how tryptophan deficiencies influence the longevity and behavior of bumble bees. Tryptophan-deficient diets led to a moderate increase in food intake, aggressiveness and mortality compared to the control diet. Vitamin B3 supplementation in tryptophan-deficient diets tended to buffer these effects on food intake and survival, and significantly reduced workers aggressiveness. Considering that the pollens of major crops and common plants, such as corn and dandelion, are deficient in tryptophan, these effects could have a strong impact on bee populations and their pollination service.

physiology↗

bioRxiv2021

Poor adult nutrition impairs learning and memory in a parasitoid wasp

Animals have evolved cognitive abilities whose impairment can incur dramatic fitness costs. While malnutrition is known to impact brain development and cognitive functions in vertebrates, little is known in insects, whose small brain appears particularly vulnerable to environmental stressors. Here, we investigated the influence of diet quality on learning and memory in the parasitoid wasp Venturia canescens. Newly emerged adults were exposed for 24h to either honey, sucrose solution 20%, sucrose solution 10%, or no food, before being conditioned in an olfactory associative learning task in which an odor (orange) was associated to a reward (host larvae). Wasps fed honey showed 3.5 times higher learning performances and 1.5 times longer memory retention times than wasps fed sucrose solutions and starved wasps. Poor diets also reduced longevity and fecundity. Our results demonstrate the importance of early adult nutrition for optimal cognitive function in these parasitoid wasps that must quickly develop olfactory memories for choosing high quality hosts for their progeny.

animal behavior and cognition↗