Biology subjects

Kouril, R.

Publications and source records attributed to Kouril, R..

4 recordsLinked to original sources

bioRxiv2026

Structural basis for far-red light harvesting in a euglenophyte photosystem II supercomplex

Photosystem II (PSII) is in eukaryotic phototrophs is generally considered to operate within a more restricted spectral range than photosystem I (PSI), in which long-wavelength chlorophylls are a well-established feature of the peripheral antenna. Whether eukaryotic PSII can acquire comparable far-red-associated properties through lineage-specific antenna diversification has remained unclear. Here we present a 3.09 [A] cryo-electron microscopy structure of the C2S2M2L2 PSII supercomplex from Euglena gracilis, a euglenophyte species harbouring a secondary plastid and unusual light-harvesting system. We show that the euglenophyte-specific antenna protein LhcE9 occupies the position corresponding to canonical Lhcb5, but in a markedly different orientation that creates a distinct interface with the PSII core, particularly with CP43. Combined structural, spectroscopic, mutagenesis and proteomic analyses support LhcE9 as the stably bound PSII antenna subunit most closely associated with the far-red state in the supercomplex. Excitation-energy-transfer calculations further indicate two fast lineage-specific antenna-to-core routes mediated by LhcE9 and PsbX. Together, these findings reveal an unexpected mode of PSII antenna diversification and provide a structural framework for far-red-associated light harvesting in PSII.

plant biology↗

bioRxiv2026

Repurposed COMT Inhibitors Tolcapone and Entacapone Selectively Suppress Aggregation and Seeding of P301 Mutant TAU in Human Neuronal Models

Background and PurposePathogenic aggregation and propagation of seed-competent TAU assemblies drive tauopathies. MAPT P301 mutations accelerate aggregation and enhance seed competence, yet pharmacological strategies selectively targeting these pathogenic species remain limited. We investigated whether the clinically approved catechol-O-methyltransferase inhibitors tolcapone (TOL) and entacapone (ENT) preferentially modulate mutant TAU aggregation and seeding. Experimental ApproachTOL and ENT effects on TAU aggregation were evaluated via cell-free assays, surface plasmon resonance (SPR), and in silico docking. Functional consequences of compound-modified fibrils were assessed in mutant TAU-expressing SH-SY5Y cells. Translational relevance was examined in human induced pluripotent stem cell (hiPSC)-derived neurons exposed to pathogenic K18 fibrils, followed by post-seeding compound treatment. Key ResultsBoth compounds dose-dependently inhibited TAU aggregation, exhibiting greater potency, stronger SPR binding affinities, and more favorable computed interaction energies for P301S mutant versus wild-type TAU. Fibrils formed with TOL or ENT induced less downstream TAU oligomerization and phosphorylation in SH-SY5Y cells, with TOL showing superior protection. In hiPSC-derived neurons, post-seeding treatment with either compound decreased fibril-induced, sarkosyl-insoluble TAU aggregation and phosphorylation without overt cytotoxicity. Conclusion and ImplicationsTOL and ENT preferentially inhibit the aggregation and seeding of pathogenic P301 mutant TAU. This supports mutation-focused pharmacological strategies and highlights catechol scaffolds as viable starting points for the development of disease-modifying therapeutics. Future research must determine the precise interaction mechanisms with aggregation intermediates and evaluate in vivo efficacy in animal models.

neuroscience↗

bioRxiv2026

Insight into GABA shunt-associated aldehyde dehydrogenases (ALDH) and stress responses of ALDH superfamily in moss and barley

We explored the expression of the aldehyde dehydrogenase (ALDH) superfamily in two model plants, Physcomitrium patens (moss) and Hordeum vulgare (barley), under various stress conditions. The ALDH enzymes are crucial for oxidizing aldehydes to carboxylic acids and are involved in multiple metabolic pathways. We found significant differences in enzyme expression between moss and barley within the same ALDH families. We then focused on the ALDH5, ALDH10, and ALDH21 families, which are part of the {gamma}-aminobutyric acid (GABA) shunt, noting that the ALDH21 family is absent in barley. The kinetic properties of ALDH10 and ALDH5 enzymes were analyzed, revealing that PpALDH5F1 exhibits high specificity for succinic semialdehyde (SSAL), a product of GABA. The crystal structure of PpALDH5F1 identified key residues for SSAL binding. Knockout mutants of moss aldh5F2, aldh10A1, and aldh21A1 showed slightly smaller colonies than the wild-type. GABA and glutamate levels were elevated in aldh5F2 and aldh21A1 knockouts due to a partially blocked GABA shunt pathway, while aldh10A1 knockout showed no changes in GABA levels. Transcriptomic data revealed a link between several genes, including six upregulated glutathione-S-transferase genes in all three aldh knockouts, suggesting a direct compensatory mechanism for oxidative stress protection via conjugation of undegraded aldehydes to glutathione. HighlightMoss knockouts of GABA shunt-associated aldehyde dehydrogenases display slower growth, changes in levels of glutamate, glutamine and GABA, and result in upregulation of several unique glutathione-S-transferase genes.

plant biology↗

bioRxiv2025

A Unique LHCE Light-Harvesting protein Family is involved in Photosystem I and II Far-Red Absorption in Euglena gracilis

Photosynthetic organisms have evolved diverse strategies to adapt to fluctuating light conditions, balancing efficient light capture with photoprotection. In green algae and land plants, this involves specialized light-harvesting complexes (LHCs), non-photochemical quenching, and state transitions driven by dynamic remodeling of antenna proteins associated with Photosystems (PS) I and II. Euglena gracilis, a flagellate with a secondary green plastid, represents a distantly related lineage whose light-harvesting regulation remains poorly understood. Although spectral shifts under different light regimes have been observed, their molecular basis was unknown. Here, through integrated phylogenomic, proteomic, structural, and spectroscopic analyses, we identify a novel chlorophyll a far-red-absorbing antenna complex in E. gracilis, composed of a species-specific Lhce protein family. This antenna forms a pentameric complex under low light and transiently associates with PSII during far-red light exposure. It is structurally and functionally distinct from canonical LHCII{square} trimers and absent in Viridiplantae. Additionally, PSI in E. gracilis is surrounded by an expanded Lhce/LhcbM belt around a minimal core. These findings reveal a unique mechanism for regulating PS antenna size in E. gracilis, distinct from known models in plants and green algae, and highlight an alternative evolutionary strategy for light acclimation in organisms with secondary plastids. HighlightEuglena gracilis features a unique, lineage-specific LhcE antenna system that dynamically associates with PSII and expands PSI light harvesting, revealing an alternative strategy for light acclimation in secondary plastids.

plant biology↗