Biology subjects

Kolibius, L.

Publications and source records attributed to Kolibius, L..

4 recordsLinked to original sources

bioRxiv2026

Polysemanticity in human hippocampal neurons

To comprehend language, the brain must navigate a high-dimensional semantic landscape while seamlessly contextualizing meaning. Inspired by recent advances in the mechanistic interpretability of large language models (LLMs), we hypothesized that the brain utilizes polysemanticity, a coding strategy wherein individual neurons represent multiple semantically unrelated features through high-dimensional superposition (Elhage et al., 2022; Olah et al., 2020). We recorded single-unit activity from the human hippocampus during podcast listening. We found that hippocampal neurons exhibit dense semantic codes characterized by multiple tuning peaks with an overdispersed, isotropic geometry. This geometry satisfies the theoretical requirements for interference minimization in superimposed codes. Furthermore, semantic responses are strongly modulated by lexical and speaker-identity context; nonetheless, the underlying population geometry remains stable. This coding strategy permits rapid contextualization without requiring specialized, context-specific neurons. Indeed, we show clear pattern separation of similar terms, along with pattern completion for held-out words. Together, these results demonstrate that the human brain leverages superposition to solve a universal computational problem: maximizing semantic capacity within a constrained representational space.

neuroscience↗

bioRxiv2021

Clock time: a foreign measure to brain dynamics

Human thought is highly flexible, achieved by evolving patterns of brain activity across groups of cells. Neuroscience aims to understand cognition in the brain by analysing these intricate patterns. We argue this goal is impeded by the time format of our data - clock time. The brain is a system with its own dynamics and regime of time, with no intrinsic concern for the human-invented second. Here, we present the Brain Time Toolbox, a software library that retunes electrophysiology data in line with oscillations that orchestrate neural patterns of cognition. These oscillations continually slow down, speed up, and undergo abrupt changes, introducing a disharmony between the brains internal regime and clock time. The toolbox overcomes this disharmony by warping the data to the dynamics of coordinating oscillations, setting oscillatory cycles as the datas new time axis. This enables the study of neural patterns as they unfold in the brain, aiding neuroscientific inquiry into dynamic cognition. In support of this, we demonstrate that the toolbox can reveal results that are absent in a default clock time format.

neuroscience↗

bioRxiv2021

Oscillations support co-firing of neurons in the service of human memory formation

Theta and gamma oscillations in the medial temporal lobe are suggested to play a critical role for human memory formation via establishing synchrony in neural assemblies. Arguably, such synchrony facilitates efficient information transfer between neurons and enhances synaptic plasticity, both of which benefit episodic memory formation. However, to date little evidence exists from humans that would provide direct evidence for such a specific role of theta and gamma oscillations for episodic memory formation. Here we investigate how oscillations shape the temporal structure of neural firing during memory formation in the medial temporal lobe. We measured neural firing and local field potentials in human epilepsy patients via micro-wire electrode recordings to analyze how brain oscillations promote co-incidences of firing between neurons during successful and unsuccessful encoding of episodic memories. The results show that phase-coupling of neurons to faster theta and gamma oscillations correlates with co-firing at short latencies ([~]20-30 ms) and occurs during successful memory formation. Phase-coupling at slower oscillations in these same frequency bands, in contrast, correlates with longer co-firing latencies and occurs during memory failure. Thus, our findings provide evidence which implicate neural oscillations into the synchronization of neural firing in the medial temporal lobe during the encoding of episodic memories.

neuroscience↗

bioRxiv2020

Theta rhythmicity governs the timing of behavioral and hippocampal responses in humans specifically during memory-dependent tasks

1.Memory formation and reinstatement are thought to lock to the hippocampal theta rhythm, predicting that encoding and retrieval processes appear rhythmic themselves. Here, we show that rhythmicity can be observed in behavioral responses from memory tasks, where participants indicate, using button presses, the timing of encoding or retrieval of cue-object associative memories. We found no evidence for rhythmicity in button presses for visual tasks using the same stimuli, or for questions about already retrieved objects. The oscillations for correctly remembered trials center in the slow theta frequency range (1-5 Hz), while responses from later forgotten trials do not lock to the behavioral oscillation. Using intracranial EEG recordings, we show that the memory task induces temporally extended phase consistency in hippocampal local field potentials at slow theta frequencies, but only for correctly remembered trials, providing a mechanistic underpinning for the theta oscillations found in behavioral responses.

neuroscience↗