Search bioRxiv⌕ Search

Biology subjects

Kinney, B.

Publications and source records attributed to Kinney, B..

2 recordsLinked to original sources

FLYWCH transcription factors act in a LIN-42/Period autoregulatory loop during gonad migration in C. elegans

Development must be coordinated across body systems but must also accommodate cell-type-specific processes. We discovered that the gene regulatory circuit controlling developmental timing in the Caenorhabditis elegans larval skin exhibits both points of convergence and divergence with the regulatory program governing the migration of the leader cell in gonad development, the distal tip cell (DTC). As a point of convergence, the conserved regulator of developmental timing, LIN-42/Period, peaks synchronously across cell types both during the L3 stage, when the DTC makes a turn in its normal migratory path, and the L4 stage in which the DTC normally continues straight ahead. We report that lin-42, like its ortholog period, autorepresses its own transcription. lin-42 is required cell-autonomously for proper pathfinding of the DTC; DTC-specific lin-42 RNAi causes the DTC to turn in the mid-L4 instead of continuing straight ahead. We identified the FLYWCH transcription factor FLH-1 as able to directly bind the lin-42a promoter. Using live-cell imaging, we show that flh-1; flh-2 double mutant DTCs have an aberrant turn in the mid-L4. These mutants derepress the L4 peak of lin-42 expression in a stage- and DTC-specific manner, and this derepression is itself lin-42-dependent. During the aberrant mid-L4 turn in flh-1; flh-2 mutants, the focal adhesion factor TLN-1 is repolarized in the direction of turning. These results reveal that bodywide developmental rhythms can be fine-tuned to integrate with specific organogenic processes. SUMMARY STATEMENTTo identify new transcriptional regulators of distal tip cell migration, a screen for C. elegans transcription factors that bind the promoter of the Period homolog lin-42, a conserved regulator of developmental timing, uncovers a pair of factors that redundantly prevent misdirected migration of the distal tip cell-the cell that guides gonadal development. Through phenotypic analysis of genetic mutants, RNAi knockdown, and live imaging, we found that these transcription factors create a cell-specific autoregulatory loop that controls lin-42 transcription and promotes directional migration by polarizing the focal adhesion protein TLN-1.

developmental biology↗

Circadian rhythm orthologs drive pulses of heterochronic miRNA transcription in C. elegans

Developmental robustness relies on precise control of the timing and order of cellular events. In C. elegans, the invariant sequence of post-embryonic cell fate specification is controlled by oscillatory patterns of heterochronic microRNA transcription that are phase-locked with the larval molting cycle1-4. How these transcriptional patterns are generated and how microRNA dosage is controlled is unknown. Here we show that transcriptional pulses of the lin-4 heterochronic microRNA are produced by two nuclear hormone receptors, NHR-85 and NHR-23, whose mammalian orthologs, Rev-Erb and ROR, function in the circadian clock. While Rev-Erb and ROR play antagonistic roles in regulating once-daily transcription5-7, we find that NHR-85 and NHR-23 bind cooperatively as heterodimers to lin-4 regulatory elements to induce a single brief pulse of expression during each larval stage. We demonstrate that the timing and duration of lin-4 transcriptional pulses are programmed by the phased overlap of NHR-85 and NHR-23 protein expression and that these regulatory interactions are post-transcriptionally controlled by LIN-42, the circadian Period ortholog in C. elegans. These findings suggest that an evolutionary rewiring of the circadian clock machinery is co-opted in nematodes to generate periodic transcriptional patterns that define cell fate progression.

developmental biology↗