Biology subjects

Kihara, M.

Publications and source records attributed to Kihara, M..

7 recordsLinked to original sources

bioRxiv2025

Submedius Thalamus Modulates Orbitofrontal Cortex Representations During Maternal Behavior in Mice

The orbitofrontal cortex (OFC) is central to cognitive and social functions, yet its presynaptic partners remain incompletely defined. In female mice, the OFC modulates infant-directed maternal caregiving behaviors essential for offspring survival in an experience-dependent manner. Here, we identify the submedius thalamus (SMT) as a major presynaptic partner of the OFC. Trans-synaptic tracing revealed intensive inputs from both the SMT and mediodorsal thalamus (MD) to OFC layer 5 excitatory neurons. A mouse line Tnnt1-Cre enabled selective targeting of these higher-order thalamic nuclei. Axonal tracing demonstrated complementary projection patterns of SMT and MD across prefrontal regions. Microendoscopic Ca2+ imaging demonstrated pup retrieval encoding in SMT and MD, but only SMT exhibited learning-related plasticity, characterized by enhanced anticipatory responses as acquired maternal behaviors. Projection-specific chemogenetic silencing demonstrated that only SMT modulates OFC activity during pup retrieval. These findings demonstrate SMT as a previously uncharacterized thalamic hub shaping cortical representations of maternal behavior. HighlightsO_LIOFCRbp4 neurons receive strong inputs from higher-order thalamic nuclei (SMT, MD). C_LIO_LISMT and MD show complementary axonal projections across prefrontal cortical cortex. C_LIO_LISMT ensembles encode pup retrieval with experience-dependent plasticity. C_LIO_LISMT inputs selectively modulate pup retrieval representation in OFCRbp4 neurons. C_LI

neuroscience↗

bioRxiv2024

Wild gut microbiome suppresses the opportunistic pathogen Aeromonas in medaka under domesticated rearing conditions

BackgroundThe gut microbiome plays a crucial role in the metabolic health and pathogen resistance of various host animals. It is also well established that external environmental factors can influence the gut microbiome, leading to differences in its composition. However, the functional implications of these differences remain poorly understood. This study examined the gut microbiome of medaka (Oryzias latipes species complex) by comparing domesticated and wild populations, with the aim of gaining insights into the functional significance of their specific characteristics, particularly those of the wild-type microbiome. ResultsFor the comparative analysis of the gut microbiome, 48 domesticated and 122 wild medaka were collected from multiple laboratories, pet stores and streams across Japan. The results showed that wild medaka exhibited significantly higher gut microbiome diversity, with a broader range of bacterial members. In contrast, the gut microbiome of domesticated medaka harbored lower microbial diversity and was consistently dominated by Aeromonas, a typical opportunistic pathogen in fish. Additionally, 88.6% of Aeromonas isolates from domesticated medaka exhibited haemolytic activity. Moreover, a domesticated rearing experiment with wild populations showed no proliferation or dominance of Aeromonas in their gut, as observed in domesticated medaka. A further rearing experiment revealed that pre-exposing antibiotic-treated medaka to sediments from their natural habitats prevented Aeromonas colonisation, even when reared under domesticated conditions. ConclusionsThese findings suggest that the habitat-derived wild gut microbiome can inhibit Aeromonas proliferation in domesticated fish, highlighting its potential to mitigate opportunistic diseases in aquaculture.

microbiology↗

bioRxiv2024

Improvement of Antibody Affinity and Using PURE Ribosome Display and Microbial Secretion System

A method has been developed for efficiently enriching and analyzing high-affinity antibody variants by combining the PURE ribosome display (ribosome display using purified cell-free protein synthesis components) with next-generation sequencing (NGS) and the Brevibacillus choshinensis secretion system, using the NZ-1 antibody, which targets the PA tag peptide (GVAMPGAEDDVV), as a model antibody. An artificial DNA encoding the single-chain fragment of binding (scFab) of the NZ-1 antibody was synthesized and actively expressed by cell-free protein synthesis system (CFPS). Region-specific saturation mutations were introduced into the scFab gene based on its structural information. The resulting scFab library was selected against the PA tag through two rounds of PURE ribosome display, followed by Illumina sequencing to identify potential scFab variants with higher affinity. The candidates were expressed as Fab fragments using the B. choshinensis secretion system. These Fab fragments were then purified from the culture supernatant using two-step column chromatography. The binding affinity of the purified Fab was evaluated using a biolayer interferometry assay, revealing a variant Fab with higher affinity than the wild-type Fab. These results demonstrate that integrating PURE ribosome display with NGS analysis and the B. choshinensis secretion expression system enables the rapid identification and analysis of high-affinity antibody variants.

synthetic biology↗

bioRxiv2024

Investigation of Intestinal Bacteria-binding Monoclonal Antibodies Derived from Rabbit Single B Cells

Immunoglobulins in the intestine have been reported to play a pivotal role in regulating the composition and function of intestinal microbiota. However, the relationship between monoclonal antibodies (mAbs) and intestinal bacteria remains elusive due to the lack of analytical methods. Here we report the utilization of Ecobody technology, a single B cell technique developed by our group, for obtaining and investigating intestinal bacteria-binding mAbs derived from single B cells of a non-immunized rabbit. Bacteroides cellulosilyticus isolated from the rabbit stool was used as the antigen for selecting B cells, followed by antibody gene amplification, mAb expression in cell-free protein synthesis (CFPS), and activity evaluation. For large-scale and cost-effective production of the selected mAb, we employed the secretion expression system for antigen-binding fragment (Fab) using Brevibacillus choshinensis, and successfully yielded [~]2.0 mg/L-culture of purified antibody with high affinity to the target bacterium. Purified Fab showed binding activity towards various intestinal bacteria, suggesting the broad specificity toward intestinal bacteria-associated antigens.

bioengineering↗

bioRxiv2023

Antiviral humoral immunity against SARS-CoV-2 Omicron subvariants induced by XBB.1.5 monovalent vaccine in infection-naive and XBB-infected individuals

To control infection with SARS-CoV-2 Omicron XBB subvariants, the XBB.1.5 monovalent mRNA vaccine has been available since September 2023. However, we have found that natural infection with XBB subvariants, including XBB.1.5, does not efficiently induce humoral immunity against the infecting XBB subvariants. These observations raise the possibility that the XBB.1.5 monovalent vaccine may not be able to efficiently induce humoral immunity against emerging SARS-CoV-2 variants, including a variety of XBB subvariants (XBB.1.5, XBB.1.16, XBB.2.3, EG.5.1 and HK.3) as well as BA.2.86. To address this possibility, we collected two types of sera from individuals vaccinated with the XBB.1.5 vaccine; those who had not been previously infected with SARS-CoV-2 and those who had been infected with XBB subvariants prior to XBB.1.5 vaccination. We collected sera before and 3-4 weeks after vaccination, and then performed a neutralization assay using these sera and pseudoviruses.

microbiology↗

bioRxiv2023

The distress context of social calls evokes a fear response in the bat Pipistrellus abramus

Bats primarily use sound information, including echolocation, for social communication. Bats under stressful conditions, for example when confronted by a predator, will emit aggressive social calls. The presentation of aggressive social calls, including distress calls (DCs), is known to increase heart rate (HR), but how this change in HR is related to the bats sound perception and how this evokes behaviors such as the fear response is unknown. Herein, we show that the perception of a distress context induces freezing behavior as a fear response in bats. We found that bats responded by freezing and displayed increased HRs when they were presented with a conspecific donor bat in a distress situation evoked by gentle poking with a cotton swab. In addition, when we presented two types of auditory oddball paradigms with different probabilities of DCs and echolocation calls (ECs), the bats HRs increased when DCs were presented as deviant or control stimuli within standard ECs but did not increase when DCs were presented as standard stimuli. These results suggest that the situational context created by the frequency of sound presentation, rather than simply a single sound feature, induces HR increases and freezing as fear responses in bats. Summary statementWe investigated the electrocardiograms of captive Pipistrellus abramus and found that their heart rate increased as a fear response when the bats heard sounds with a distress context.

animal behavior and cognition↗

bioRxiv2023

A Prefrontal Neural Circuit for Maternal Behavioural Leaning in Mice

Maternal behaviors, which are crucial for the survival of mammalian infants, require the coordinated operation of multiple brain regions to process infant cues, make decisions, and execute motor plans. Although these processes likely demand higher cognitive functions, the prefrontal areas that regulate limbic parental programs remains poorly understood. Here, we show that the orbitofrontal cortex (OFC) excitatory projection neurons promote alloparental caregiving behaviors in female mice. By chronic microendoscopy, we observed robust yet adaptable representations of pup-directed anticipatory and motor-related activities within the OFC. Some of these plastic responses were significantly overlapped with those related to nonsocial reward signals. The inactivation of OFC output reduced the phasic activities of midbrain dopamine (DA) neurons specifically tied to pup retrieval and impaired the modulation of DA release to the ventral striatum during the acquisition of alloparental behaviors. These findings suggest that the OFC transiently boosts DA activity during the acquisition phase, thereby facilitating the manifestation of alloparental behaviors.

neuroscience↗