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Biology subjects

Kidane, D. T.

Publications and source records attributed to Kidane, D. T..

2 recordsLinked to original sources

AP2-L-Dependent Processes Promote PVM Maintenance and Plasmodium Liver-stage Development

Successful malaria infection requires transformation of Plasmodium sporozoites into replicative exo-erythrocytic forms (EEFs) within hepatocytes, a process requiring a functional parasitophorous vacuole membrane (PVM) and interactions with host cellular pathways. ApiAP2 transcription factors regulate developmental progression throughout the Plasmodium life cycle. AP2-L consists of an extended amino terminal region and two AP2 domains and is highly expressed in asexual stage trophozoites, sporozoites and early EEFs, but its role in these stages is poorly understood. We characterized the functional consequences of deleting the entire P. berghei ap2-l coding sequence on the erythrocytic cycle in vivo, sporozoite gene expression, liver-stage development, and hepatocyte-parasite interactions. AP2L-KO parasites maintained erythrocytic replication but sporozoite inoculation failed to establish blood-stage infection in mice. AP2-L loss decreased transcripts encoding proteins involved in sporozoite gliding motility, host-cell entry, and rhoptry secretion. Motif discovery upstream of a subset of these genes suggests possible direct targets of AP2-L. Infected HepG2 cells showed reduced EEF numbers and sizes, impaired parasite DNA replication, and abnormal parasite positioning relative to the host nucleus. PVMs of AP2L-KO parasites exhibited aberrant localization of proteins, absence of tubular vacuolar network extensions, and sensitivity to detergent. These abnormalities were accompanied by increased accumulation of the host's autophagy-associated protein around parasites, suggesting efficient host-mediated elimination. Additionally, AP2L-KO parasites displayed reduced association with the host microtubule-organizing center, Golgi compartments, and COPB2-positive vesicular structures, suggesting an impairment in uptake of nutrients. Together, these findings demonstrate that AP2-L directs both vacuolar biogenesis and host cytoskeletal/vesicular capture in liver-stage parasites.

microbiology↗

sRNAs enriched in outer membrane vesicles of pathogenic Flavobacterium psychrophilum interact with immune genes of rainbow trout

Outer membrane vesicles (OMVs) released by gram-negative bacteria during host-pathogen interactions harbor cargos, such as DNA, RNA, toxins, and virulence factors. We hypothesized that sRNAs carried within OMVs of Flavobacterium psychrophilum interact with host immune genes and affect their expression. OMVs were isolated from F. psychrophilum and visualized using transmission electron microscopy (TEM). RNA-Seq datasets generated from whole-cell F. psychrophilum and their OMVs indicated enrichment of specific sRNAs in the OMVs compared to the parent cell. Fluorescent in situ hybridization (FISH) and confocal microscopy confirmed the expression of a randomly chosen sRNA. Integrated RNA-Seq analyses of host transcriptome and bacterial sRNAs on day 5 post-infection of F. psychrophilum-resistant and -susceptible rainbow trout genetic lines revealed 516 protein-coding, 595 lncRNA, and 116 bacterial sRNA differentially expressed (DE) transcripts. Integrated and network analyses of these DE transcripts revealed immune genes targeted by bacterial sRNAs. On the top of these genes, an isoform encoding anaphase-promoting complex subunit 13 (ANAPC13_1) was highly upregulated and exhibited interaction and reciprocal expression with 21 DE sRNAs enriched in OMVs and/or located in pathogenicity islands (PAIs). In vitro treatment of the rainbow trout epithelial cell line RTgill-W1 with OMVs showed signs of cell autolysis accompanied by dynamic changes in expression of host genes when profiled 24h following treatment. The OMV-enriched sRNAs, soFE013584 and soFE002123, showed high interactions with the protection of telomeres 1 gene (POT1); essential for chromosome stability and cellular viability. Modulation of the host gene expression following OMV-treatment, which favors elements from the phagocytic, endocytic, and antigen presentation pathways in addition to HSP70, HSP90, and cochaperone proteins, provided evidence for a potential role of OMVs in boosting the host immune response. In conclusion, our work identified novel microbial targets and inherent characteristics of OMVs that could open up new avenues of treatment and prevention of fish infections.

microbiology↗