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Biology subjects

Khanday, I.

Publications and source records attributed to Khanday, I..

2 recordsLinked to original sources

High-frequency synthetic apomixis in hybrid rice

Introducing asexual reproduction through seeds - apomixis - into crop species could revolutionize agriculture by allowing F1 hybrids with enhanced yield and stability to be clonally propagated. Engineering synthetic apomixis has proven feasible in inbred rice through the inactivation of three genes (MiMe), which results in the conversion of meiosis into mitosis in a line ectopically expressing the BABYBOOM1 (BBM1) parthenogenetic trigger in egg cells. However, only 10-30% of the seeds were clonal. We show here that synthetic apomixis can be induced in a F1 hybrid of rice by inducing MiMe mutations and egg cell expression of BBM1 in a single step. We generated hybrid plants that produced more than 95% of clonal seeds across multiple generations. Clonal apomictic plants maintained the phenotype of the F1 hybrid along successive generations. Our results demonstrate that there is no barrier to almost fully penetrant synthetic apomixis in an important crop species, rendering it compatible with use in agriculture.

plant biology↗

Rice embryogenic trigger BABY BOOM1 promotes somatic embryogenesis by upregulation of auxin biosynthesis genes

Somatic embryogenesis, a powerful tool for clonal propagation and for plant transformation, involves cellular reprogramming of differentiated somatic cells to acquire pluripotency. Somatic embryogenesis can be induced by treating explants with plant growth regulators. However, several plant species including agronomically important cereal crops remain recalcitrant to dedifferentiation and transformation except from embryonic tissues. Somatic embryogenesis can also be induced by ectopic expression of select embryonic factors, including in cereals by BABY BOOM (BBM) transcription factors. How BBM genes bypass the need for exogenous hormones is not well understood. Here, we investigated downstream targets during induction of somatic embryogenesis in rice by OsBBM1 ((Oryza sativa BABY BOOM1). Transient induction of OsBBM1 led to the upregulation of auxin biosynthesis OsYUCCA genes. Continued induction of OsBBM1 resulted in somatic embryogenesis without the need for exogenous auxins. Genetic mutant analysis of OsBBM1 downstream targets, OsYUCCA6, OsYUCCA7 and OsYUCCA9, show that they are required for normal rice development including root and shoot development. Somatic embryogenic potential of OsYUCCA triple mutants was highly compromised despite the presence of exogenous auxin. Additionally, we show that somatic embryogenesis induction by exogenous auxin in rice requires functional BBM genes. Thus, OsBBM1 mediated cellular reprogramming and somatic embryogenesis likely involves increased localized auxin through direct upregulation of OsYUCCA genes. This study reveals mechanistic details of how somatic embryogenesis is established in differentiated tissues in rice, a monocot model and agronomically important cereal crop, with the potential utility to improve regeneration from tissue culture for recalcitrant plants in future. One-sentence summaryRice BABY BOOM1 induces somatic embryogenesis from differentiated tissues by promoting auxin biosynthesis through direct upregulation of YUCCA genes.

developmental biology↗