Kennedy, E. B. | Search bioRxiv

bioRxiv2026

Canonical NLR immune receptor architecture enforces EDS1-dependency onto divergent TIR domains

Toll/interleukin-1 receptor (TIR) enzymes are prominent immune components in diverse organisms across the tree of life. In flowering plants, TIRs are often integrated into nucleotide binding leucine-rich repeat (NLR) receptors whose oligomerization-dependent biochemical activities create second messengers perceived by ENHANCED DISEASE SUSCEPTIBILITY1 (EDS1)-family signaling complexes. TIR-NLRs and TIR proteins are present across the full spectrum of plant evolution, yet EDS1 signaling is a derived trait in seed plants. Here, we examined the functional dependency of diverse plant TIRs on the EDS1 pathway in the angiosperms Nicotiana benthamiana and Nicotiana tabacum. While the isolated TIR domains from non-seed plants generally required EDS1 for immune cell death activation, we also identified TIRs that functioned independent of EDS1. However, chimeric TIR-NLRs incorporating these diverse TIR domains onto the AtWRR4a receptor chassis showed a full reversion to EDS1-dependency. Extending this phenomenon further, we demonstrated that the AtWRR4a architecture enforces EDS1-dependence onto a bacterial TIR domain that is otherwise EDS1-independent. Collectively, our work demonstrates that NLR immune receptor architecture influences TIR-related immunity and provides further context to their ancient acquisition into plant immune systems.

plant biology↗

bioRxiv2025

In-depth phenotyping reveals unexpected floral trait variation in Mimulus cardinalis across a range-wide latitudinal gradient

Background & AimsPollinators play a crucial role in the evolution and diversification of flowering plants. Intraspecific variation in floral traits occurs frequently and likely reflects variable biotic and abiotic selection pressures. The hummingbird-pollinated monkeyflower Mimulus cardinalis occurs across western North America, where geographic mosaics of selection have likely influenced its natural history, due to this wide species range. Processes driving early stages of divergence and speciation remain poorly understood, though theory predicts that trait divergence will be most likely at range edges. Within M. cardinalis, which is usually red-flowered and hummingbird-pollinated, two independent shifts to yellow flowers have occurred at the northern and southern range edges, including a population found on Cedros Island, off the coast of Baja California, Mexico. MethodsThis study characterises the local climatic variables of five accessions of M. cardinalis derived from locations across a latitudinal geographic gradient. Highly integrative methods in metabolomics and morphological analyses were used to characterise a suite of pollinator-relevant floral traits across the range of M. cardinalis species variation. We use transcriptomics and whole genome sequencing to study underlying genetic variation in two yellow-coloured, range-edge accessions. Key ResultsThis study uncovers high levels of variation in morphology, nectar properties, pigmentation and scent profile across geographically diverse Mimulus cardinalis accessions, in addition to profiling how these accessions are perceived by potential pollinators. We find high levels of phenotypic variation across M. cardinalis, particularly in the biochemistry of pigment and scent, where inflorescences that appear to be the same shade of red have completely different anthocyanin profiles. Floral trait-underlying genetic differences between different M. cardinalis lines were also investigated, revealing potential mechanisms underlying floral diversification. ConclusionsThis work highlights the importance of interplay between floral trait diversification, pollinator perception and climate. This work also highlights the importance of considering suites of floral traits in a quantitative fashion when studying intraspecific variation in relation to species range. This study also provides genetic insight into changes in these traits and provides many future directions to study the early stages of pollinator-mediated trait differentiation across a species range.

plant biology↗