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Karmakar, J.

Publications and source records attributed to Karmakar, J..

2 recordsLinked to original sources

Heavy Metal-Resistant, Plastic-Degrading Bacillus sp. Isolated from Landfill Leachate: Identification and Characterization

Landfill leachates in rapidly urbanizing regions like Dhaka present a complex ecological challenge owing to the concurrent buildup of heavy metals and plastic waste. Despite the severity of this pollution, the role of indigenous multi-functional bacteria in mitigating these mixed contaminants remains poorly understood. This research sought to isolate and characterize bacteria resistant to heavy metals and capable of degrading plastics from the Aminbazar and Matuail landfills and evaluate their bioremediation potential. Physicochemical analysis confirmed extreme contamination, with heavy metal levels (Pb, Cr, Cd, Cu) significantly exceeding WHO safety limits. Out of 81 isolates, nearly half exhibited multi-metal resistance and polyethylene (PE) degradation capacity. Statistical analysis showed a significant correlation between plastic degradation and multi-metal tolerance, suggesting a linked evolutionary adaptation. Enzymatic assays confirmed enzymes (e.g., urease, catalase, citrate and esterase) as drivers of both plastic degradation and heavy metal tolerance in leading isolates. Molecular screening identified the resistance genes pbrA and alkB, while the high prevalence of Class 1 integrons (80% in pbrA-positive isolates) points to a high potential for horizontal gene transfer in these environments. Furthermore, MALDI-TOF MS identified the functional isolates as Bacillus sp. with FTIR verifying the contribution of specific cell-surface functional groups to metal biosorption. These results underscore the promise of native Bacillus strains as promising agents for the development of sustainable, integrated biotechnologies for landfill restoration and complex waste management.

microbiology↗

Dengue Protease-Mediated Activation and Polarization of Macrophages

Controlled activation of macrophages to achieve desired phenotypes in vivo and in vitro could lead to possible treatments for several inflammatory and proliferative diseases. This investigation uniquely established that dengue protease enhances the polarization and activation of human and murine macrophages following extracellular exposure. It was observed that macrophages have a robust response to extracellularly administered purified dengue NS2B/NS3 protease; it stimulated the macrophages in classical M1 directions and enhanced both the mitogen-activated protein kinases (MAPK) and c-Jun N-terminal kinases (JNK). The cells exhibited an increase in the intracellular levels of proinflammatory cytokines such as IL-2, IL-6, IL-12, and IFN-{gamma} and an elevation of phosphorylated versions of Akt, P38 MARK, SAPK, and ERK. In tandem, this investigation also established that the heightened responses of stimulated cells were associated with an increase in the cellular reactive oxygen species (ROS) level and the nuclear translocation of the NF-{kappa}B (P65) protein. The cell viability assay showed that NS2B/NS3 protease exerts no major toxic effect on macrophages after 24 hours of treatment, even at a dosage (20 g/ml) which was four times higher than the effective dose (5 g/ml). Remarkably, we also observed that the native form of the viral protease, which drives its enzyme activities, had no bearing on the antigenic qualities of the enzyme. Thus, our study highlighted the efficacy of dengue viral NS2B/NS3 protease as a non-toxic ex vivo macrophage activating/polarizing agent and may serve a vital role in macrophage-based cell therapy in the near future. O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=101 SRC="FIGDIR/small/624958v1_ufig1.gif" ALT="Figure 1"> View larger version (31K): org.highwire.dtl.DTLVardef@d29cd1org.highwire.dtl.DTLVardef@1357e96org.highwire.dtl.DTLVardef@109cc52org.highwire.dtl.DTLVardef@45536b_HPS_FORMAT_FIGEXP M_FIG C_FIG

molecular biology↗