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Karkkainen, T.

Publications and source records attributed to Karkkainen, T..

4 recordsLinked to original sources

Task-Dependent Effects of Channel Density on Multivariate Pattern Analysis and Spatial Representational Similarity Analysis: Evidence from Three EEG Datasets

Despite the widespread use of EEG decoding and representational similarity analysis (RSA), the extent of the impact of electrode density on these multivariate approaches has not been systematically evaluated, particularly across different cognitive domains. Here, we systematically compared four electrode configurations (19, 32, 64, and 128 channels) across three EEG datasets encompassing visual perception, visual search, and emotional processing. All datasets were recorded at 128 channels and subsequently reduced to 64, 32, and 19 channels via electrode subset selection based on the international 10-20 system. Time-resolved decoding and spatial RSA were computed for each configuration with paired statistical evaluation. Decoding sensitivity demonstrated clear task dependence: in the color-harmony paradigm, performance improved markedly with higher densities, consistent with spatially distributed perceptual representations, whereas decoding in the icon-search and dot-probe tasks remained stable across densities, indicating diminishing returns of additional electrodes although all configuration yielded robust decoding accuracies that above chance level. RSA results were comparatively robust, with relative representational similarity structures largely preserved even for 16 channel counts. These findings demonstrate that low-density setups can be sufficient, offering practical guidance for EEG channel selection and supporting the use of low-density EEG in real-world applications, including wearable systems, mobile EEG recordings, and clinical or rehabilitation settings.

neuroscience↗

EEG-based analyses reveal different temporal processing patterns in aesthetic evaluation

BackgroundExisting studies estimate harmony values using the color harmony model, but how these values are reflected in distinct neural stages (early automatic vs. late evaluative) and shape subjective preferences remains unexamined. MethodsTo fill this gap, we recorded behavioral and event-related potential data (N=30 adults, age: 29.20{+/-}2.38 years old) to examine whether the predictions of color harmony theory regarding harmonious vs. disharmonious color combinations align with neural activity from a color perception paradigm. ResultsBehavioral results showed that two-color combinations received higher aesthetic pleasantness ratings than three-color combinations, while the ratings for color harmony were relatively smaller than for disharmony. Univariate ERP analysis revealed that P1 amplitude for harmonious color was significantly higher than for disharmonious color, particularly when three colors were present. In contrast, the amplitude and latency of P2 were significantly impacted by the number of colors. Additionally, multivariate pattern analysis further demonstrated that neural activity reliably differentiated between harmonious vs. disharmonious color combinations and two-color vs. three-color combinations during both P1 and P2 time window. ConclusionsThese findings indicate that harmonious versus disharmonious color combinations subtly influenced early visual processing, while the number of colors used in the design had a stronger influence on aesthetic judgments.

neuroscience↗

Site effects depth denoising and signal enhancement using dual-projection based ICA model

Combining magnetic resonance imaging (MRI) data from multi-site studies is a popular approach for constructing larger datasets to greatly enhance the reliability and reproducibility of neuroscience research. However, the scanner/site variability is a significant confound that complicates the interpretation of the results, so effective and complete removal of the scanner/site variability is necessary to realize the full advantages of pooling multi-site datasets. Independent component analysis (ICA) and general linear model (GLM) based denoising methods are the two primary methods used to denoise scanner/site-related effects. Unfortunately, there are challenges with both ICA-based and GLM-based denoising methods to remove site effects completely when the signals of interest and scanner/site-related noises are correlated, which may occur in neuroscience studies. In this study, we propose an effective and powerful denoising strategy that implements dual-projection (DP) theory based on ICA to remove the scanner/site-related effects more completely. This method can separate the signal effects correlated with noise variables from the identified noise effects for removal without losing signals of interest. Both simulations and vivo structural MRI datasets, including a dataset from Autism Brain Imaging Data Exchange II and a traveling subject dataset from the Strategic Research Program for Brain Sciences, were used to test the proposed GLM- and ICA-based denoising methods and our DP-based ICA denoising method. Results show that DP-based ICA

neuroscience↗

Population differences in the length, early-life dynamics, and heritability of telomeres among European pied flycatchers

Telomere length and shortening rate are increasingly used as biomarkers for long-term costs in ecological and evolutionary studies because of their relationships with survival and fitness. Both early-life conditions and growth, and later-life stressors can create variation in telomere shortening rate. Studies on between- population telomere length and dynamics are scarce, despite the expectation that populations exposed to varying environmental constraints would present divergent telomere length patterns. The pied flycatcher (Ficedula hypoleuca) is a passerine bird breeding across Eurasia (from Spain to western Siberia) and migrating through the Iberian Peninsula to spend the non-breeding period in sub-Saharan Africa. Thus, different populations show marked differences in migration distance. We studied the large-scale variation of telomere length and early-life dynamics in the pied flycatcher by comparing six European populations across a north- south gradient (Finland, Estonia, England, and Spain) predicting negative effect of migration distance on adult telomere length, and of nestling growth on nestling telomere dynamics. There were clear population differences in telomere length, with English birds from mid-latitudes having the longest telomeres. Telomere length did not thus show consistent latitudinal variation and was not linearly linked to differences in migration distance. Early-life telomere shortening rate tended to vary between populations. Fast growth was associated with shorter telomeres in the early life, but faster nestling growth affected telomeres more negatively in northern than southern populations. While the sources of between-population differences in telomere-related biology remain to be more intensively studied, our study illustrates the need to expand telomere studies at the between-population level.

zoology↗