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Biology subjects

Kakimoto, T.

Publications and source records attributed to Kakimoto, T..

2 recordsLinked to original sources

Polar auxin transport regulates initial auxin patterning and polar nuclear migration during lateral root initiation

In Arabidopsis thaliana, local auxin accumulation in xylem-pole pericycle (XPP) cells specifies lateral root founder cells, which establish de novo cell polarity manifested by polar nuclear migration and subsequent asymmetric division. Here, we developed a fast-maturing, XPP/early lateral root primordium (LRP)-specific R2D2 auxin reporter (fx-R2D2) to visualize auxin dynamics with high spatiotemporal resolution during LRP initiation. We demonstrate that auxin increases broadly on the convex side of XPP during root bending. Within this region, cells showing particularly strong auxin responses emerged, and subsequently underwent polar nuclear migration and asymmetric division, initiating an LRP. When two LRPs initiated in close proximity, auxin levels in one rapidly decreased after the cell division, followed by cessation of further division. These findings provide a clear picture of auxin dynamics during LRP initiation. Under uniform auxin treatment, de novo LRP formation events occur. Auxin treatment initially induced a uniform auxin response at a high level, followed by localized auxin depletion in regions where LRPs did not subsequently form, demonstrating that auxin depletion as well as accumulation shapes the auxin patterns during LRP initiation. Furthermore, we reveal that local PIN-mediated polar auxin transport regulates both de novo auxin patterning and polar nuclear migration during LRP initiation.

plant biology↗

Gastrointestinal transit mathematical model in mice treated with antibiotics

High-resolution fecal pharmacokinetics are crucial for optimizing therapeutic design and evaluating gastrointestinal motility. However, empirical studies with detailed time series data remain limited. This study aims to characterize fecal pharmacokinetics through high-frequency sampling and parallelized fecal concentration quantification, establishing a simple pharmacokinetics model with physiologically interpretable parameters. We quantified vancomycin concentrations in fecal samples collected at a minimum interval of 4 hours from C57BL/6J mice following a single oral administration of either a low (1 mg/mL) or high (20 mg/mL) dose. Fecal concentrations gradually increased and exhibited an exponential decay, leading to the development of a compartmental model with an absorption phase. This simple model accurately fit the experimental data and provided physiological explanations for intra- and inter-individual pharmacokinetics variability. The results suggest that inter-individual differences in pharmacokinetics are attributable to fecal elimination capacity, which may be influenced by drug dosage via changes in gastrointestinal motility. Since the model predicts antibiotic concentrations within the gastrointestinal tract, it can be applied to fundamental studies investigating the effects of antibiotics on the gut microbiome and gastrointestinal motility.

physiology↗