Biology subjects

Joss, A.

Publications and source records attributed to Joss, A..

4 recordsLinked to original sources

bioRxiv2022

Wastewater microorganisms impact microbial diversity and important ecological functions of stream periphyton

Wastewater treatment plant effluents can impact microbial communities in receiving streams. However, little is known about the role of microorganisms in wastewater as opposed to other wastewater constituents, such as nutrients and micropollutants. We aimed therefore at determining the impact of wastewater microorganisms on the microbial diversity and function of periphyton, key microbial communities in streams. Periphyton was grown in flow-through channels that were continuously alimented with a mixture of stream water and unfiltered or ultra-filtered wastewater. Impacts were assessed on periphyton biomass, activities and tolerance to micropollutants, as well as on microbial diversity. Our results showed that wastewater microorganisms colonized periphyton and modified its community composition, resulting for instance in an increased abundance of Chloroflexi and a decreased abundance of diatoms and green algae. This led to shifts towards heterotrophy, as suggested by the changes in nutrient stoichiometry and the increased mineralization potential of carbon substrates. An increased tolerance towards micropollutants was only found for periphyton exposed to unfiltered wastewater but not to ultra-filtered wastewater, suggesting that wastewater microorganisms were responsible for this increased tolerance. Overall, our results highlight the need to consider the role of wastewater microorganisms when studying potential impacts of wastewater on the receiving water body. Environmental implicationThe present study investigates the impact of wastewater microorganisms on periphyton, i.e. communities forming the microbial skin of streambeds. We were able to disentangle specific effects of wastewater microorganisms in the context of the complex wastewater matrix. Indeed, wastewater microorganisms induced strong changes in periphyton community composition and function, suggesting the need to consider wastewater microbial communities as a stressor per se, similarly to, e.g., nutrients and micropollutants. Moreover, since periphyton is at the basis of the food web in streams, these changes may have consequences for higher trophic levels.

ecology↗

bioRxiv2020

Distinct growth stages shaped by an interplay of deterministic and neutral processes are indispensable for functional anammox biofilms

Complex microbial biofilms orchestrating mainstream anaerobic ammonium oxidation (anammox) represent one of the most promising energy-efficient mechanisms of fixed nitrogen elimination from anthropogenic waste waters. However, little is known about the ecological processes that are driving microbial community assembly leading to functional anammox biofilms in engineered ecosystems. Here, we use fluorescence in situ hybridization and 16S rRNA sequencing combined with network modelling to elucidate the contribution of stochastic and deterministic processes during anammox biofilm development from first colonization to maturation in a carrier-based anammox reactor. We find that distinct stages of biofilm development emerge naturally in terms of structure and community composition. These stages are characterized by dynamic succession and an interplay of stochastic and deterministic processes. The staged process of biofilm establishment appears to be the prerequisite for the anticipated growth of anammox bacteria and for reaching a biofilm community structure with the desired metabolic capacities. We discuss the relevance of this improved understanding of anammox community ecology and biofilm development concerning its practical application in the start-up and configuration of anammox biofilm reactors.

microbiology↗

bioRxiv2020

Temperature modulates stress response in anammox reactors

Autotrophic nitrogen removal by anaerobic ammonium oxidizing (anammox) bacteria is an energy-efficient nitrogen removal process in wastewater treatment. However, full-scale deployment under mainstream conditions remains challenging for practitioners due to the high stress susceptibility of anammox bacteria towards fluctuations in dissolved oxygen and temperature. Here, we investigated the response of microbial biofilms with verified anammox activity to oxygen shocks under favorable and cold temperature regimes. Genome-centric metagenomics and metatranscriptomics were used to investigate the stress response on various biological levels. We show that temperature regime and strength of oxygen perturbations induced divergent responses from the process level down to the transcriptional profile of individual taxa. Temperature induced distinct transcriptional states in compositionally identical communities and transient pulses of dissolved oxygen resulted in the upregulation of stress-response only under favorable temperatures. Anammox species and other key biofilm taxa display different transcriptional responses to the induced stress regimes.

microbiology↗

bioRxiv2018

Biomass segregation between biofilm and flocs improves the control of nitrite-oxidizing bacteria in mainstream partial nitritation and anammox processes

The control of nitrite-oxidizing bacteria (NOB) challenges the implementation of partial nitritation and anammox (PN/A) processes under mainstream conditions. The aim of the present study was to understand how operating conditions impact microbial competition and the control of NOB in hybrid PN/A systems, where biofilm and flocs coexist. A hybrid PN/A moving-bed biofilm reactor (MBBR; also referred to as integrated fixed film activated sludge or IFAS) was operated at 15 {degrees}C on aerobically pre-treated municipal wastewater (23 mgNH4-N{middle dot}L-1). Ammonium-oxidizing bacteria (AOB) and NOB were enriched primarily in the flocs, and anammox bacteria (AMX) in the biofilm. After decreasing the dissolved oxygen concentration (DO) from 1.2 to 0.17 mgO2{middle dot}L-1 - with all other operating conditions unchanged - washout of NOB from the flocs was observed. The activity of the minor NOB fraction remaining in the biofilm was suppressed at low DO. As a result, low effluent NO3- concentrations (0.5 mgN{middle dot}L-1) were consistently achieved at aerobic nitrogen removal rates (80 mgN{middle dot}L-1{middle dot}d-1) comparable to those of conventional treatment plants. A simple dynamic mathematical model, assuming perfect biomass segregation with AOB and NOB in the flocs and AMX in the biofilm, was able to qualitatively reproduce the selective washout of NOB from the flocs in response to the decrease in DO-setpoint. Similarly, numerical simulations indicated that flocs removal is an effective operational strategy to achieve the selective washout of NOB. The direct competition for NO2- between NOB and AMX - the latter retained in the biofilm and acting as a \"NO2-sink\" - was identified by the model as key mechanism leading to a difference in the actual growth rates of AOB and NOB (i.e., NOB < AOB in flocs) and allowing for the selective NOB washout. Experimental results and model predictions demonstrate the increased operational flexibility, in terms of variables that can be easily controlled by operators, offered by hybrid systems as compared to solely biofilm systems for the control of NOB in mainstream PN/A applications.\n\nHighlightsO_LIHybrid PN/A systems provide increased operational flexibility for NOB control\nC_LIO_LIAOB and NOB enrich primarily in the flocs, and AMX in the biofilm (\"NO2-sink\")\nC_LIO_LIAMX use NO2- allowing to differentiate AOB and NOB growth rates\nC_LIO_LIA decrease in DO or an increase in floc removal leads to selective NOB washout from flocs\nC_LIO_LIThe activity of the minor NOB fraction in the biofilm is suppressed at limiting DO\nC_LI\n\n\n\nO_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=63 SRC=\"FIGDIR/small/480780v2_ufig1.gif\" ALT=\"Figure 1\">\nView larger version (21K):\norg.highwire.dtl.DTLVardef@cad5deorg.highwire.dtl.DTLVardef@9efef3org.highwire.dtl.DTLVardef@7409feorg.highwire.dtl.DTLVardef@3c1043_HPS_FORMAT_FIGEXP M_FIG C_FIG

systems biology↗