Jabado, R. W. | Search bioRxiv

bioRxiv2019

The thin edge of the wedge: extremely high extinction risk in wedgefishes and giant guitarfishes

O_LIThe process of understanding the rapid global decline of sawfishes (Pristidae) has revealed great concern for their relatives, the wedgefishes (Rhinidae) and giant guitarfishes (Glaucostegidae), not least because all three families are targeted for their high-value and internationally-traded white fins.\nC_LIO_LIThe objective of this study was to assess the extinction risk of all 10 wedgefishes and 6 giant guitarfishes by applying the International Union for Conservation of Nature (IUCN) Red List Categories and Criteria, and to summarise their biogeography and habitat, life history, exploitation, use and trade, and population status.\nC_LIO_LIWedgefishes and giant guitarfishes have overtaken sawfishes as the most imperilled marine fish families globally, with all but one of the 16 species facing an extremely high risk of extinction due to a combination of traits - limited biological productivity, presence in shallow waters overlapping with some of the most intense and increasing coastal fisheries in the world, and over-exploitation in target and bycatch fisheries driven by the need for animal protein and food security in coastal communities and trade in meat and high-value fins.\nC_LIO_LITwo species with very restricted ranges, the Clown Wedgefish (Rhynchobatus cooki) of the Indo-Malay Archipelago and the False Shark Ray (Rhynchorhina mauritaniensis) of Mauritania may be very close to extinction.\nC_LIO_LIOnly the Eyebrow Wedgefish (Rhynchobatus palpebratus) is not assessed as Critically Endangered, due to it occurring primarily in Australia where fishing pressure is low, and some management measures are in place. Australia represents a lifeboat for the three wedgefish and one giant guitarfish species occurring there.\nC_LIO_LITo conserve populations and permit recovery, a suite of measures will be required which will need to include species protection, spatial management, bycatch mitigation, and harvest and international trade management, all of which will be dependent on effective enforcement.\nC_LI

ecology↗

bioRxiv2018

Phylogenomics and species delimitation of mobulid rays reveals cryptic diversity and a new species of manta ray

Practical biodiversity conservation relies on delineation of biologically meaningful units, particularly with respect to global conventions and regulatory frameworks. Traditional approaches have typically relied on morphological observation, resulting in artificially broad delineations and non-optimal species units for conservation. More recently, species delimitation methods have been revolutionised with High-Throughput Sequencing approaches, allowing study of diversity within species radiations using genome-wide data. The highly mobile elasmobranchs, manta and devil rays (Mobula spp.), are threatened globally by targeted and bycatch fishing pressures resulting in recent protection under several global conventions. However, a lack of global data, morphological similarities, a succession of recent taxonomic changes and ineffectual traceability measures combine to impede development and implementation of a coherent and enforceable conservation strategy. Here, we generate genome-wide Single Nucleotide Polymorphism (SNP) data from among the most globally and taxonomically representative set of mobulid tissues. The resulting phylogeny and delimitation of species units represents the most comprehensive assessment of mobulid diversity with molecular data to date. We find a mismatch between current species classifications, and optimal species units for effective conservation. Specifically, we find robust evidence for an undescribed species of manta ray in the Gulf of Mexico and show that species recently synonymised are reproductively isolated. Further resolution is achieved at the population level, where cryptic diversity is detected in geographically distinct populations, and indicates potential for future traceability work determining regional location of catch. We estimate the optimal species tree and uncover substantial incomplete lineage sorting, where standing variation in extinct ancestral populations is identified as a driver of phylogenetic uncertainty, with further conservation implications. Our study provides a framework for molecular genetic species delimitation that is relevant to wide-ranging taxa of conservation concern, and highlights the potential for genomic data to support effective management, conservation and law enforcement strategies.

genomics↗