Search bioRxiv⌕ Search

Biology subjects

Hofmann, L.

Publications and source records attributed to Hofmann, L..

3 recordsLinked to original sources

Yolk granule fusion and microtubule aster formation regulate cortical granule translocation and exocytosis in zebrafish oocytes

Dynamic reorganization of the cytoplasm is key to many core cellular processes, such as cell division, cell migration and cell polarization. Cytoskeletal rearrangements are thought to constitute the main drivers of cytoplasmic flows and reorganization. In contrast, remarkably little is known about how dynamic changes in size and shape of cell organelles affect large-scale cytoplasmic organization. Here, we show that within the maturing zebrafish oocyte, the surface localization of exocytosis-competent cortical granules upon germinal vesicle breakdown is achieved by the combined activities of yolk granule fusion and microtubule aster formation and translocation. We find that cortical granules are moved towards the oocyte surface through radially-outward cytoplasmic flows induced by yolk granules fusing within the oocyte center in response to GV breakdown. We further show that vesicles decorated with the small Rab GTPase Rab11, a master regulator of vesicular trafficking and exocytosis, accumulate together with cortical granules at the oocyte surface. This accumulation is achieved by Rab11-positive vesicles being transported by acentrosomal microtubule asters, the formation of which is induced by the release of CyclinB/Cdk1 upon GV breakdown, and which display a net movement towards the oocyte surface by preferentially binding to the oocyte actin cortex. We finally demonstrate that the decoration of cortical granules by Rab11 at the oocyte surface is needed for cortical granule release and subsequent chorion elevation, a process central in oocyte activation. Collectively, these findings unravel a yet unrecognized role of organelle fusion, functioning together with cytoskeletal rearrangements, in determining cytoplasmic organization during oocyte maturation.

developmental biology↗

An in cell site-specific labeling methodology reveals conformational changes of proteins in bacteria

Gaining new structural information on proteins in their native cellular environments will shed light on many enzymatic reaction mechanisms and encourage the development of new therapeutic approaches. During the last decade, in cell electron paramagnetic resonance (EPR) spectroscopy experiments have provided high-resolution data on conformational changes of proteins within the cell. However, one of the major obstacles of EPR spectroscopy is the spin-labeling process, which until now was performed only outside the cellular environment (i.e., exogenously). The spin-labeled protein is then injected into the cell, which limits the protein size and the cellular system that can be used. Here, we describe a new spin-labeling approach that can be applied to over-expressed proteins in Escherichia coli (i.e., endogenously). This approach uses a Cu(II) ion bound to a ligand, which has high affinity to a dHis site in the protein of interest. The presence of a nearby 19F-phenylalanine residue can be exploited to verify that the Cu(II)-ligand indeed bound to the protein target. This new methodology allows for the study of any protein, regardless of size or the cellular system used.

biophysics↗

A traditional Chinese medicine, Respiratory Detox Shot (RDS), inhibits the infection of SARS-CoV, SARS-CoV-2, and the Influenza A virus in vitro

The ongoing global pandemic of coronavirus disease 2019 (COVID-19) has resulted in the infection of over 60 million people and has caused over 1.4 million deaths as of December 2020 in more than 220 countries and territories. Currently, there is no effective treatment for COVID-19 to reduce mortality. We investigated the potential anti-coronavirus activities from an oral liquid of traditional medicine, Respiratory Detox Shot (RDS), which contains mostly herbal ingredients traditionally used to manage lung diseases. Here we report that RDS inhibited the infection of target cells by SARS-CoV and SARS-CoV-2 pseudoviruses, and by infectious wild-type SARS-CoV-2. We further demonstrated that RDS inhibits viral early infection steps. In addition, we found that RDS can also block the infection of target cells by Influenza A virus. These results suggest that RDS may broadly inhibit the infection of respiratory viruses.

microbiology↗