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Heo, S.

Publications and source records attributed to Heo, S..

2 recordsLinked to original sources

Effects of depression on prefrontal striatal goal directed and habitual control

Depression is characterized by deficits in the reinforcement learning (RL) process. Although many computational and neural studies have extended our knowledge of the impact of depression on RL, most focus on habitual control (model-free RL), yielding a relatively poor understanding of goal-directed control (model-based RL) and arbitration control to find a balance between the two. We investigate the effects of depression on goal-directed and habitual control in the prefrontal-striatal circuitry. We find that depression is associated with attenuated state and reward prediction error representation in the insula and caudate, a disruption of arbitration control in the predominantly inferior lateral prefrontal cortex and frontopolar cortex, and suboptimal value-action conversion. These findings fully characterize how depression influences different levels of RL, challenging previous conflicting views that depression simply influences either habitual or goal-directed control. Our study creates possibilities for various clinical applications, such as early diagnosis and behavioral therapy design.

neuroscience

TnClone: high-throughput clonal analysis usingTn5-mediated library construction and de novo assembly

A typical molecular cloning procedure requires Sanger sequencing for validation, which becomes cost-prohibitive and labour-intensive for large-scale clonal analysis of genotype-phenotype studies. Here we present a Tn5-mediated clonal analysis platform TnClone, which uses next-generation sequencing (NGS) to rapidly and cost-effectively analyze a large number of clones. We also developed a user-friendly graphical user interface and have provided general guidelines for conducting validation experiments. Using TnClone, we achieved more than 20-fold cost reduction compared with the cost incurred using conventional Sanger sequencing and detected low-frequency mutant clones (~10%) in mixed samples. We tested our programme and achieved 99.4% sensitivity. Our platform provides rapid turnaround with minimal hands-on time for secondary evaluation as NGS technology continues to evolve.

synthetic biology