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Biology subjects

Gabriel Marroig

Publications and source records attributed to Gabriel Marroig.

3 recordsLinked to original sources

Modularity and Morphometrics: Error Rates in Hypothesis Testing

The study of modularity in morphological systems has increased in the past twenty years, parallel to the popularization of geometric morphometrics, which has led to the emergence of different criteria for detecting modularity on landmark data. However, compared to usual covariance matrix estimators, Procrustes estimators have properties that hinder their use. Here, we compare different representations of form, focusing on detecting modularity patterns defined a priori; we also compare two metrics: one derived from traditional morphometrics (MHI) and another that emerged in the context of landmark data (RV). Using Anthropoid skulls, we compare these metrics over three representations of form: interlandmark distances, Procrustes residuals, and local shape variables. Over Procrustes residuals, both tests fail to detect modularity patterns, while in remaining representations they show the distinction between early and late development in skull ontogeny. To estimate type I and II error rates, we built covariance matrices of known structure; these tests indicate that, considering both effect and sample sizes, tests using MHI are more robust than those using RV. However, both metrics have low power when used on Procrustes residuals. Thus, we conclude that the influence of development and function is poorly represented on Procrustes estimators for covariance matrices.

Evolutionary Biology

EvolQG - An R package for evolutionary quantitative genetics

We present an open source package for performing evolutionary quantitative genetics analyses in the R environment for statistical computing. Evolutionary theory shows that evolution depends critically on the available variation in a given population. When dealing with many quantitative traits this variation is expressed in the form of a covariance matrix, particularly the additive genetic covariance matrix or sometimes the phenotypic matrix, when the genetic matrix is unavailable. Given this mathematical representation of available variation, the EvolQG package provides functions for calculation of relevant evolutionary statistics, estimation of sampling error, corrections for this error, matrix comparison via correlations and distances, and functions for testing evolutionary hypotheses on taxa diversification.

Evolutionary Biology

Quantitative Genetics and Modularity in cranial and mandibular morphology of Calomys expulsus

Patterns of genetic covariance between characters (represented by the covariance matrix G) play an important role in morphological evolution, since they interact with the evolutionary forces acting over populations. They are also expected to influence the patterns expressed in their phenotypic counterparts (P), because of limits imposed by multiple developmental and functional restrictions on the genotype/phenotype map. We have investigated genetic covariances in the skull and mandible of the vesper mouse (Calomys expulsus) in order to estimate the degree of similarity between genetic and phenotypic covariances and its potential roots on developmental and functional factors shaping those integration patterns. We use a classic adhoc analysis of morphological integration based on current state of art of developmental/functional factors during mammalian ontogeny and also applied a novel methodology that makes use of simulated evolutionary responses. We have obtained P and G that are strongly similar, for both skull and mandible; their similarity is achieved through the spatial and temporal organization of developmental and functional interactions, which are consistently recognized as hypothesis of trait associations in both matrices.

Evolutionary Biology