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Fountas, C.

Publications and source records attributed to Fountas, C..

2 recordsLinked to original sources

Scaling of mouse somitogenesis by coupling of cell cycle to segmentation clock oscillations

While scaling developmental processes is fundamental to maintaining robust tissue patterning, the mechanisms underlying this process are enigmatic. Somitogenesis, the periodic segmentation of growing mesodermal tissue in vertebrate embryos1, involves precise scaling with the unsegmented presomitic mesoderm (PSM) over developmental time and under perturbation2-4. Somitogenesis is spatiotemporally regulated by FGF and Wnt morphogen gradients and the segmentation clock -- oscillations in Notch, Wnt, and FGF signalling5-7. Here, we find that cell proliferation is distributed throughout the oscillating PSM. Long-term single-cell tracking in mouse embryo tails uncovered a correlation between cell cycle progression and the segmentation clock, with microfluidics-based entrainment indicating coupling between the cell cycle and signalling oscillations, likely through S-phase inducing Cyclins. A theoretical model suggests this coupling ensures uniform PSM growth, uniform morphogen dilution and precise somite formation, which we validated experimentally by blocking cell proliferation. Our findings reveal that coupling cell proliferation to signalling oscillations is crucial for robust somitogenesis and precise somite scaling.

developmental biology↗

Identifying cross-lineage dependencies of cell-type specific regulators in gastruloids

Correct gene expression levels in space and time are crucial for normal development. Advances in genomics enable the inference of gene regulatory programs that are active during development. However, this approach cannot capture the complex multicellular interactions that occur during embryogenesis. Compared to model organisms such as fruit flies and zebrafish, the growth of mammalian embryos in utero further complicates the analysis of cell-cell communication during development. However, in vitro models of mammalian development such as gastruloids can overcome this limitation. Using time-resolved single-cell chromatin accessibility analysis, we have delineated the regulatory landscape during gastruloid development and thereby identified the critical drivers of developmental transitions. We observed that gastruloids develop from pluripotent cells driven by the transcription factor (TF) dimer OCT4-SOX2 and differentiate along two main branches. A mesoderm branch characterized by the TF MSGN1 and a spinal cord branch characterized by CDX1, 2, 4 (CDX). Consistent with our lineage reconstruction, {Delta}CDX gastruloids fail to form spinal cord. Conversely, Msgn1 ablation inhibits the development of paraxial mesoderm, as expected. However, this also abolished spinal cord cells, which is surprising given that MSGN1 is not associated with differentiation along this branch. Therefore, formation of paraxial mesoderm is required for spinal cord development. To validate this, we generated chimeric gastruloids using {Delta}MSGN1 and wildtype cells, which formed both spinal cord and paraxial mesoderm. Strikingly, {Delta}MSGN1 cells specifically contributed to spinal cord, suggesting that cell-cell interactions between paraxial mesoderm and spinal cord are necessary for the formation of the latter. Our work has important implications for the study of cell-cell communication in development and how gene regulatory programs are functionally executed to form complex multicellular developmental structures.

systems biology↗