Search bioRxiv⌕ Search

Biology subjects

Finc, K.

Publications and source records attributed to Finc, K..

5 recordsLinked to original sources

Brain network reconfiguration during prediction error processing

Learning from experience is driven by reward prediction errors--signals that reflect updates to our expectations of reward. Despite numerous studies on neural correlates of reward prediction errors, the question of how large-scale brain networks reconfigure in response to reward prediction error signalling remains open. Here we ask how functional networks change in response to reward prediction errors depending on the context. In our study participants performed the probabilistic reversal learning task in functional magnetic resonance imaging (fMRI) scanner in two experimental contexts: a reward-seeking setting and a punishment-avoiding. We found that the participants learning speed depended on the sign of the prediction error but not on the experimental context. Whole-brain network analysis revealed a multi-scale community structure with a separate striatal reward network emerging at a finer topological scale and a ventromedial prefrontal network emerging at a coarser scale. We also found that the integration between large-scale networks increased when switching from positive to negative prediction error events. This pattern of large-scale network reconfiguration aligns with the broad range of research showing increased network integration with increased cognitive demands. Our findings offer a first sketch of how processing reward prediction error affects the functional connectivity of brain-wide networks.

neuroscience↗

Effect of LSD and music on the time-varying brain dynamics

RationalePsychedelics are getting closer to being widely used in clinical treatment. Music is known as a key element of psychedelic-assisted therapy due to its psychological effects, specifically on the emotion, meaning-making and sensory processing. However, there is still a lack of understanding in how psychedelics influence brain activity in experimental settings involving music listening. ObjectivesThe main goal of our research is to investigate the effect of music, as a part of "setting", on the brain states dynamics after lysergic acid diethylamide (LSD) intake. MethodsWe used an open dataset, where a group of 15 participants underwent two functional MRI scanning sessions under LSD and placebo influence. Every scanning session contained three runs: two resting-state runs separated by one run with music listening. We applied K-Means clustering to identify the repetitive patterns of brain activity, so-called brain states. For further analysis, we calculated states dwell time, fractional occupancy and transition probability. ResultsThe interaction effect of music and psychedelics led to change in the time-varying brain activity of the task-positive state. LSD, regardless of the music, affected the dynamics of the state of combined activity of DMN, SOM and VIS networks. Crucially, we observed that the music itself could potentially have a long-term influence on the resting-state, in particular on states involving task-positive networks. ConclusionsThis study indicates that music, as a crucial element of "setting", can potentially have an influence on the subjects resting-state during psychedelic experience. Further studies should replicate these results on a larger sample size.

neuroscience↗

Analysis of task-based functional MRI data preprocessed with fMRIPrep

Functional magnetic resonance imaging (fMRI) is a standard tool to investigate the neural correlates of cognition. fMRI noninvasively measures brain activity, allowing identification of patterns evoked by tasks performed during scanning. Despite the long history of this technique, the idiosyncrasies of each dataset have led to the use of ad-hoc preprocessing protocols customized for nearly every different study. This approach is time-consuming, error-prone, and unsuitable for combining datasets from many sources. Here we showcase fMRIPrep (http://fmriprep.org), a robust tool to prepare human fMRI data for statistical analysis. This software instrument addresses the reproducibility concerns of the established protocols for fMRI preprocessing. By leveraging the Brain Imaging Data Structure (BIDS) to standardize both the input datasets --MRI data as stored by the scanner-- and the outputs --data ready for modeling and analysis--, fMRIPrep is capable of preprocessing a diversity of datasets without manual intervention. In support of the growing popularity of fMRIPrep, this protocol describes how to integrate the tool in a task-based fMRI investigation workflow.

bioinformatics↗

Dynamic reconfiguration of functional brain networks during working memory training

The functional network of the brain continually adapts to changing environmental demands. The consequence of behavioral automation for task-related functional network architecture remains far from understood. We investigated the neural reflections of behavioral automation as participants mastered a dual n-back task. In four fMRI scans equally spanning a 6-week training period, we assessed brain network modularity, a substrate for adaptation in biological systems. We found that whole-brain modularity steadily increased during training for both conditions of the dual n-back task. In a dynamic analysis, we found that the autonomy of the default mode system and integration among task-positive systems were modulated by training. The automation of the n-back task through training resulted in non-linear changes in integration between the fronto-parietal and default mode systems, and integration with the subcortical system. Our findings suggest that the automation of a cognitively demanding task may result in more segregated network organization.

neuroscience↗

Time-varying nodal measures with temporal community structure: a cautionary note to avoid misquantification

In network neuroscience, temporal network models have gained popularity. In these models, network properties have been related to cognition and behaviour. Here we demonstrate that calculating nodal properties that are dependent on temporal community structure (such as the participation coefficient) in time-varying contexts can potentially lead to misleading results. Specifically, with regards to the participation coefficient, increases in integration can be inferred when the opposite is occuring. Further, we present a temporal extension to the participation coefficient measure (temporal participation coefficient) that circumnavigates this problem by jointly considering all community partitions assigned to a node through time. The proposed method allows us to track a nodes integration through time while adjusting for the possible changes in the community structure of the overall network.

neuroscience↗