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Fevre, E. M.

Publications and source records attributed to Fevre, E. M..

3 recordsLinked to original sources

Investigation of the global transportation of Culicoides biting midges, vectors of livestock and equid arboviruses, from flower-packing plants in Kenya

BackgroundIn recent decades there has been a huge increase in the export of cut flowers from countries in Africa and elsewhere to European flower markets, with the vast majority first entering the Netherlands for local use or for export. Coincidentally, two significant livestock disease outbreaks caused by viruses associated with Africa or other tropical regions, were first detected in the Netherlands (bluetongue virus, BTV, 2006) and in western Germany about 200 km from the Netherlands border (Schmallenberg virus, SBV, 2011). This study aimed to determine whether Culicoides biting midges, the vectors of BTV and SBV, are present within flower-packaging plants in East Africa, and therefore whether Culicoides could be unknowingly exported during the shipping of cut flowers. MethodsField sampling was undertaken at a flower-packaging facility in Kenya, East Africa. The facility undertook all stages of cut flower production from maintaining rootstock through to packaging and shipping to an airport for international export. Trapping was undertaken at each stage of production (rootstock, propagation, inside growing greenhouses, in the packing-house, inside cold-storage rooms, during transportation) using CDC Light Emitting Diode (LED) light traps. Hand-held aspirators were used to obtain individual insects directly from flowers and around composting sites, while emergence traps studied insect emergence from compost, leaf-litter and flowers discarded at quality control checkpoints. ResultsA maximum nightly catch of 269 Culicoides were identified on a half-acre smallholding, containing 15 ruminants and 40 birds, located 20 m from the nearest greenhouse. Greatest numbers of Culicoides were trapped at a pond (n = 23) and leaf-litter compost site (n = 19) within the curtilage of the flower-packaging plant. Of the seven greenhouses sampled, three had Culicoides trapped overnight (mean = 4, range: 1-9), and no Culicoides were trapped in the propagation units. No Culicoides were trapped in the pack house, cold-store, or during transportation of the flowers to the airport for shipment. No Culicoides emerged from emergence traps or were trapped when aspirating directly from flowers. ConclusionsThis is the first study to investigate whether Culicoides are present within flower packaging plants in Africa. The results highlight that although present in small numbers both outside and within greenhouses, the presence of Culicoides declined with each stage of production. Therefore, the risk of exporting Culicoides with packaged cut flowers is non-zero but likely very small.

ecology↗

Household geckos as a potential vector for Salmonella transmission in Malawi

Salmonella was isolated from 23/79 (29.1%) gecko stool samples from households in southern Malawi. Whole genome sequencing of 47 isolates revealed 27 Salmonella serovars spanning two subspecies. Our results demonstrate that geckos play an important role in the carriage and potentially, transmission of Salmonella within households.

ecology↗

The genome of Caenorhabditis bovis

The free-living nematode Caenorhabditis elegans is a key laboratory model for metazoan biology. C. elegans is also used as a model for parasitic nematodes despite being only distantly related to most parasitic species. All [~]65 Caenorhabditis species currently in culture are free-living with most having been isolated from decaying plant or fungal matter. Caenorhabditis bovis is a particularly unusual species, having been isolated several times from the inflamed ears of Zebu cattle in Eastern Africa where it is believed to be the cause of bovine parasitic otitis. C. bovis is therefore of particular interest to researchers interested in the evolution of nematode parasitism and in Caenorhabditis diversity. However, as C. bovis is not in laboratory culture, it remains little studied and details of its prevalence, role in bovine parasitic otitis and relationships to other Caenorhabditis species are scarce. Here, by sampling livestock markets and slaughterhouses in Western Kenya, we successfully reisolate C. bovis from the ear of adult female Zebu. We sequence the genome of C. bovis using the Oxford Nanopore MinION platform in a nearby field laboratory and use the data to generate a chromosome-scale draft genome sequence. We exploit this draft genome to reconstruct the phylogenetic relationships of C. bovis to other Caenorhabditis species and reveal the changes in genome size and content that have occurred during its evolution. We also identify expansions in several gene families that have been implicated in parasitism in other nematode species, including those associated with resistance to antihelminthic drugs. The high-quality draft genome and our analyses thereof represent a significant advancement in our understanding of this unusual Caenorhabditis species.

genomics↗